Definition Escherichia coli IAI39 chromosome, complete genome.
Accession NC_011750
Length 5,132,068

Click here to switch to the map view.

The map label for this gene is 218701682

Identifier: 218701682

GI number: 218701682

Start: 3547230

End: 3548303

Strand: Direct

Name: 218701682

Synonym: ECIAI39_3392

Alternate gene names: NA

Gene position: 3547230-3548303 (Clockwise)

Preceding gene: 218701681

Following gene: 218701683

Centisome position: 69.12

GC content: 45.34

Gene sequence:

>1074_bases
ATGGTCCATCCTTTTTTACAGGTTCAGAATATGACTGGCAAATTACGCTTTGAAGTGAACGATAACCAGGGCTGTTTCAT
ATTTCCGGAAACCTGGTTTGGCTCGTTGCTGGATGAGTTTGAAGAACTGATTGATGCATACGATGCGGATGAAATTAGCG
AAACAAGTTACATCAACAAACTCAGGCGCCTTGCCCGACAGGAGAATGACTTTATTGATGTACACGCTCACTTGGCATAC
GTATTTCTGGAGCAGAATGCCCCGCGTAAGGCGCTGAATGCTGCCCTTAAAGGGCTGGCAATTGGCAATCGTCTTATCCC
TGAAGGTTTCAGTGGCAGAATCATCTGGATACATCCTGACAACCGACCTTTTCTTCGTGCCCTCTATGCGGCAATCCTGG
CAAATGCACATTTACAGCGTCATCAGGATGCCATCATGCTCATTGAAAAAATACTGGATTACAATCCCGAAGATAATCAT
GGTGCACGCTGGCTACTGGGACCGGAACTGTTACGCACTGGCGCTCATGAACAGGCACGCCATATACTGCAGGAACATGC
AGATGAATTTTCACCTTACTGGTATGAACTCGGCCTTCTGCATTTTCTTAATGGGGAACTGGTAAAAGCTGCAACTGCAT
TTCGTCGCGGCTTTGCGGCAAATACTTACATCGCAGAAATACTGTGCGGAAATCTGCATCCATTTCCACTTGCTGTATGG
CATAACTTTTCAGGCGGTCCGGATACTGCCGAAGATTATTATGCCACATACCACCCGTTATGGGGGCAATATCCGGAAGC
ATTGCTGTTTGTAAACTGGCTCTATAATCATTCCTCTGTGCTGCATGAACGGGCAGAAATCATTAAATGCGCCGAAATGC
TGATGCAGGAAGATGATTTCGAAATATGCGAAAGTATTTTAAGACAGCAGGAGAAGTTGCGTGAAAGAATTGATGAGACG
CTTTCTGAGAAAATTGTACAGAAATGCAGAAATATGAATGGTGAATATGTCTGGCCCTGGATATTGCCGTTTTCAGCGGC
AGGCATGAAACATACTGGCATACAGTATCAGTAG

Upstream 100 bases:

>100_bases
ACCACAGAACAGAATTCACTGTATTATCATGGGCAACGTTAATCCCGGACAATAAAAGGACACCGATGCCAGGCATCACA
ATTTTTATAGCCTGCAGGTT

Downstream 100 bases:

>100_bases
ATATTGCATTAGTGTATCCTGCACACAAGTAATAATTTATTCACCAATAATAACACTGTTAATGCCCCCTTCCCCTGGTT
GTCAGCCAGGGGTTATCTTC

Product: SHI-2 pathogenicity island protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MVHPFLQVQNMTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINKLRRLARQENDFIDVHAHLAY
VFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPDNRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNH
GARWLLGPELLRTGAHEQARHILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVW
HNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQEKLRERIDET
LSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ

Sequences:

>Translated_357_residues
MVHPFLQVQNMTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINKLRRLARQENDFIDVHAHLAY
VFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPDNRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNH
GARWLLGPELLRTGAHEQARHILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVW
HNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQEKLRERIDET
LSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ
>Mature_357_residues
MVHPFLQVQNMTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINKLRRLARQENDFIDVHAHLAY
VFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPDNRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNH
GARWLLGPELLRTGAHEQARHILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVW
HNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQEKLRERIDET
LSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41411; Mature: 41411

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPFLQVQNMTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINK
CCCCHHEEECCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRRLARQENDFIDVHAHLAYVFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPD
HHHHHHHCCCEEEHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
NRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNHGARWLLGPELLRTGAHEQAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCHHHHH
HILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVW
HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEE
HNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDF
ECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EICESILRQQEKLRERIDETLSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVHPFLQVQNMTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINK
CCCCHHEEECCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRRLARQENDFIDVHAHLAYVFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPD
HHHHHHHCCCEEEHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
NRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNHGARWLLGPELLRTGAHEQAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCHHHHH
HILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVW
HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEE
HNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDF
ECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EICESILRQQEKLRERIDETLSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA