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The map label for this gene is int

Identifier: 218701681

GI number: 218701681

Start: 3545739

End: 3547004

Strand: Direct

Name: int

Synonym: ECIAI39_3391

Alternate gene names: 218701681

Gene position: 3545739-3547004 (Clockwise)

Preceding gene: 218701680

Following gene: 218701682

Centisome position: 69.09

GC content: 48.82

Gene sequence:

>1266_bases
ATGGCACTGACTGACGCAAAAATCCGGGCTGCAAAGCCCACTGACAAGGCTTATAAACTCACTGACGGGGCCGGCATGTT
CCTGCTGGTTCATCCTAATGGTTCCCGTTACTGGCGTCTCCGTTATCGTATTCTGGGTAAGGAGAAAACCCTGGCACTTG
GTGTGTATCCGGAAGTTTCTCTCTCCGAAGCTCGTACAAAACGGGATGAGGCCCGAAAACTGATTTCAGAGGGGATTGAC
CCTTGCGAACAGAAAAGAGTTAAAAAAGTAGTCCCTGATTTACAGCTCTCTTTTGAACATATTGCACGACGCTGGCATGC
CAGTAATAAACAATGGGCACAATCACACAGCGATAAAGTACTCAAAAGCCTCGAGACACACGTTTTCCCCTTTATCGGCA
ACCGGGATATCACAACACTCAGTACCCCGGACCTGCTTATTCCTGTTCGTGCTGCAGAAGCAAAACAAATTTATGAAATC
GCCAGTCGTCTGCAGCAAAGAATATCTGCTGTAATGCGTTACGCCGTACAGTCTGGCATCATCAGATATAACCCGGCTCT
GGATATGGCTGGTGCATTGACCACGGTAAAACGCCAGCATCGCCCCGCTCTTGATCTTTCTCGCCTGCCTGAACTTTTGT
CGCGTATTAGCAGTTACAAGGGGCAACCTGTCACCCAGCTTGCCGTTATGCTGAATTTACTGGTTTTTATTCGTTCCAGT
GAACTCAGATACGCCCGGTGGTCTGAAATTGATATTGACAATGCCATGTGGACTATTCCAGCCGAACGCGAACCTCTGCC
CGGCGTAAAATTCTCACACCGGGGCTCCAAGATGCGAACACCACATCTTGTGCCAATCAGCAAACAGGCTGTAGCCATAC
TGACAGAACTTCAGACATGGGCTGGTGAAAATGGTCTGATATTTACGGGTGCACATGACCCGCGTAAACCAATCAGTGAA
AATACTGTAAATAAGGCCCTGAGGGTGATGGGGTATGACACAACCCAGGAAGTCTGTGGCCATGGATTCCGGGCGATGGC
GTGCAGTGCATTGATTGAATCAGGTTTGTGGTCCCGCGATGCTGTGGAACGTCAGATGAGCCATCAGGAGCGTAATGGTG
TACGTGCTGCGTATATCCATAAAGCAGAACATCTGGAAGAACGTCGGCTTATGCTGCAATGGTGGGCAGATTTTCTGGAT
GCAAACAGGGAGGAGTGTATCAGTCCGTTTGAATATGCAAAAGTTAACAATCCACTGAAAAGGTGA

Upstream 100 bases:

>100_bases
AGATTCTCCCCACATCAACCCCATTGTGTGGGTATAATTGCGGGTATACCCCAGTTCGACAGAATTTGTACCCTCTTTAA
CGCATTCAGAAGGCTGAACT

Downstream 100 bases:

>100_bases
CTGAACGCCATTTACACACATGCTCTTCCTCTTAAGGGGAAGAGCACCCGCCTCAATCAATTTCTTTTTTATGCCGGCGG
AACCATCAGCCAGGCTGAGG

Product: Prophage integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGID
PCEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEI
ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSS
ELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTWAGENGLIFTGAHDPRKPISE
NTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLD
ANREECISPFEYAKVNNPLKR

Sequences:

>Translated_421_residues
MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGID
PCEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEI
ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSS
ELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTWAGENGLIFTGAHDPRKPISE
NTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLD
ANREECISPFEYAKVNNPLKR
>Mature_420_residues
ALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDP
CEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIA
SRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSE
LRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTWAGENGLIFTGAHDPRKPISEN
TVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA
NREECISPFEYAKVNNPLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=414, Percent_Identity=36.231884057971, Blast_Score=245, Evalue=4e-66,
Organism=Escherichia coli, GI1788690, Length=404, Percent_Identity=35.1485148514851, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1788974, Length=404, Percent_Identity=35.1485148514851, Blast_Score=235, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 47967; Mature: 47836

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS
CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCC
LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGI
HHHHHHHHCCCCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSS
EEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
ELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTW
CCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRD
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCHH
AVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREECISPFEYAKVNNPLK
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCC
R
C
>Mature Secondary Structure 
ALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS
CCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCC
LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGI
HHHHHHHHCCCCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSS
EEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
ELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTW
CCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRD
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCHH
AVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREECISPFEYAKVNNPLK
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]