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The map label for this gene is scrY [H]

Identifier: 218701264

GI number: 218701264

Start: 3067924

End: 3069441

Strand: Direct

Name: scrY [H]

Synonym: ECIAI39_2964

Alternate gene names: 218701264

Gene position: 3067924-3069441 (Clockwise)

Preceding gene: 218701263

Following gene: 218701265

Centisome position: 59.78

GC content: 47.1

Gene sequence:

>1518_bases
ATGTATAAAAAAACAACTTTGGCAATGTTAATTGCTTTGCTGACCGGTGCTACAACGGTACATGCGCAAACGGATATTAG
CAGTATCGAATCTCGACTGGCGGCGTTGGAACAACGTTTAAAAAATGCGGAATCCCGCGCCCAGGCGGCAGAAGCAAGGG
CCAAAACAGCTGAATTACAGGTTCAGAAACTGGCTGAAACACAACAACAAAATCAGCTAACAACTCAAGAAGTAGCACAG
AGAACAGTTCAGCTCGAACAGAAATCCGCAGAAAACAGTGGTTTTGAGTTTCATGGCTATGCCCGTTCCGGGTTACTGAT
GAATGATGCCGCTTCCAGTAGCAAAAGTGGGCCGTATCTGACTCCCGCAGGTGAAACTGGTGGAGCTGTTGGCCGTCTGG
GAAATGAAGCCGATACCTATGTCGAGTTAAATGTAGAACATAAACAAACACTGGATAACGGTGCGACCACACGCTTTAAA
GCAATGTTGGCTGACGGACAAAGAGATTACAACGACTGGACTGGCGGCTCCAGTAACCTGAATATCCGACAGGCTTTTGC
CGAACTGGGCGCATTACCAAGTTTTACCGGAGCATTCAAAGACAGTACTGTCTGGGCTGGTAAACGCTTTGATCGCGACA
ATTTTGATATTCACTGGTTAGACTCCGATGTCGTATTTTTAGCGGGAACGGGCGGCGGTATCTATGACGTAAAATGGAAC
GATACATTCCGCAGTAACTTTTCTCTCTACGGACGTAATTTCGGCGATCTTGATGATATCGACAATAACGTTCAGAACTA
CATCCTCACCATGAATCATTATGCAGGCCCCTTCCAGTTGATGGTTAGCGGATTACGGGCAAAAGATAATGATGATCGAA
AAGATGCCAATGGTGATCTCATTCAAACTGATGCTGCAAATACTGGCGTACATGCGTTAGTTGGTCTGCACAATGACACT
TTCTATGGCCTGCGTGAAGGGACGGCAAAAACAGCACTGCTATATGGCCATGGCCTGGGTGCGGAAGTCAAAGGGATTGG
CTCCGATGGCGCTCTGCTGTCTGAGGCGAATACCTGGCGCTTCGCATCTTACGGCACAACACCTCTGGGAAGCGGTTGGT
ATGTTGCGCCAGCAATTCTCGCGCAAAGCAGTAAAGATCGTTACGTCAAAGGCGATAGCTACGAATGGGTGACCTTCAAT
ACACGTCTGATCAAAGAGGTAACACAGAATTTTGCTCTGGCCTTTGAGGGTAGCTATCAATATATGGATCTGAAGCCAAA
GGGGTATCAAAACCACAACGCCGTAAACGGCAGCTTCTATAAACTCACCTTTGCTCCAACTCTAAAAGCTAACGATATCA
ATAATTTCTTTAGCCGTCCGGAGCTTCGCCTGTTTGCCACCTGGATGGACTGGAGCAGCAAACTTGATGATTTTGCCAGC
AATGACGCTTTCGGCAGCAGTGGTTTCAATACTGGCGGAGAGTGGAATTTTGGTGTCCAAATGGAAACCTGGTTTTAA

Upstream 100 bases:

>100_bases
AAATAATTGCTCTGTCTAAAAAGTCAGCTTTATTATCAACACCTAAACCGGTTTAGCATTTTAGCAATTTTTATAATTCT
CTGATGGGACGCGACAAATT

Downstream 100 bases:

>100_bases
TACCAGACAGCCTCACGGATGTGAGGCTTTTACTGAAATAACAATGAATTAGAGGGTTATATGGATTTCGATAAAATCGC
CCAATCGTTGCTTCCTTTAT

Product: Sucrose porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MYKKTTLAMLIALLTGATTVHAQTDISSIESRLAALEQRLKNAESRAQAAEARAKTAELQVQKLAETQQQNQLTTQEVAQ
RTVQLEQKSAENSGFEFHGYARSGLLMNDAASSSKSGPYLTPAGETGGAVGRLGNEADTYVELNVEHKQTLDNGATTRFK
AMLADGQRDYNDWTGGSSNLNIRQAFAELGALPSFTGAFKDSTVWAGKRFDRDNFDIHWLDSDVVFLAGTGGGIYDVKWN
DTFRSNFSLYGRNFGDLDDIDNNVQNYILTMNHYAGPFQLMVSGLRAKDNDDRKDANGDLIQTDAANTGVHALVGLHNDT
FYGLREGTAKTALLYGHGLGAEVKGIGSDGALLSEANTWRFASYGTTPLGSGWYVAPAILAQSSKDRYVKGDSYEWVTFN
TRLIKEVTQNFALAFEGSYQYMDLKPKGYQNHNAVNGSFYKLTFAPTLKANDINNFFSRPELRLFATWMDWSSKLDDFAS
NDAFGSSGFNTGGEWNFGVQMETWF

Sequences:

>Translated_505_residues
MYKKTTLAMLIALLTGATTVHAQTDISSIESRLAALEQRLKNAESRAQAAEARAKTAELQVQKLAETQQQNQLTTQEVAQ
RTVQLEQKSAENSGFEFHGYARSGLLMNDAASSSKSGPYLTPAGETGGAVGRLGNEADTYVELNVEHKQTLDNGATTRFK
AMLADGQRDYNDWTGGSSNLNIRQAFAELGALPSFTGAFKDSTVWAGKRFDRDNFDIHWLDSDVVFLAGTGGGIYDVKWN
DTFRSNFSLYGRNFGDLDDIDNNVQNYILTMNHYAGPFQLMVSGLRAKDNDDRKDANGDLIQTDAANTGVHALVGLHNDT
FYGLREGTAKTALLYGHGLGAEVKGIGSDGALLSEANTWRFASYGTTPLGSGWYVAPAILAQSSKDRYVKGDSYEWVTFN
TRLIKEVTQNFALAFEGSYQYMDLKPKGYQNHNAVNGSFYKLTFAPTLKANDINNFFSRPELRLFATWMDWSSKLDDFAS
NDAFGSSGFNTGGEWNFGVQMETWF
>Mature_505_residues
MYKKTTLAMLIALLTGATTVHAQTDISSIESRLAALEQRLKNAESRAQAAEARAKTAELQVQKLAETQQQNQLTTQEVAQ
RTVQLEQKSAENSGFEFHGYARSGLLMNDAASSSKSGPYLTPAGETGGAVGRLGNEADTYVELNVEHKQTLDNGATTRFK
AMLADGQRDYNDWTGGSSNLNIRQAFAELGALPSFTGAFKDSTVWAGKRFDRDNFDIHWLDSDVVFLAGTGGGIYDVKWN
DTFRSNFSLYGRNFGDLDDIDNNVQNYILTMNHYAGPFQLMVSGLRAKDNDDRKDANGDLIQTDAANTGVHALVGLHNDT
FYGLREGTAKTALLYGHGLGAEVKGIGSDGALLSEANTWRFASYGTTPLGSGWYVAPAILAQSSKDRYVKGDSYEWVTFN
TRLIKEVTQNFALAFEGSYQYMDLKPKGYQNHNAVNGSFYKLTFAPTLKANDINNFFSRPELRLFATWMDWSSKLDDFAS
NDAFGSSGFNTGGEWNFGVQMETWF

Specific function: Porin for sucrose uptake [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 55622; Mature: 55622

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKTTLAMLIALLTGATTVHAQTDISSIESRLAALEQRLKNAESRAQAAEARAKTAELQ
CCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQKLAETQQQNQLTTQEVAQRTVQLEQKSAENSGFEFHGYARSGLLMNDAASSSKSGPYL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCEE
TPAGETGGAVGRLGNEADTYVELNVEHKQTLDNGATTRFKAMLADGQRDYNDWTGGSSNL
CCCCCCCCCHHCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
NIRQAFAELGALPSFTGAFKDSTVWAGKRFDRDNFDIHWLDSDVVFLAGTGGGIYDVKWN
HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEC
DTFRSNFSLYGRNFGDLDDIDNNVQNYILTMNHYAGPFQLMVSGLRAKDNDDRKDANGDL
CCCCCCCEEECCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCE
IQTDAANTGVHALVGLHNDTFYGLREGTAKTALLYGHGLGAEVKGIGSDGALLSEANTWR
EEECCCCCCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCCEEECCCCEE
FASYGTTPLGSGWYVAPAILAQSSKDRYVKGDSYEWVTFNTRLIKEVTQNFALAFEGSYQ
EECCCCCCCCCCCCHHHHHHHCCCCCCEECCCCEEEEEECHHHHHHHHHCEEEEEECCEE
YMDLKPKGYQNHNAVNGSFYKLTFAPTLKANDINNFFSRPELRLFATWMDWSSKLDDFAS
EEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHC
NDAFGSSGFNTGGEWNFGVQMETWF
CCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MYKKTTLAMLIALLTGATTVHAQTDISSIESRLAALEQRLKNAESRAQAAEARAKTAELQ
CCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQKLAETQQQNQLTTQEVAQRTVQLEQKSAENSGFEFHGYARSGLLMNDAASSSKSGPYL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCEE
TPAGETGGAVGRLGNEADTYVELNVEHKQTLDNGATTRFKAMLADGQRDYNDWTGGSSNL
CCCCCCCCCHHCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
NIRQAFAELGALPSFTGAFKDSTVWAGKRFDRDNFDIHWLDSDVVFLAGTGGGIYDVKWN
HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEC
DTFRSNFSLYGRNFGDLDDIDNNVQNYILTMNHYAGPFQLMVSGLRAKDNDDRKDANGDL
CCCCCCCEEECCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCE
IQTDAANTGVHALVGLHNDTFYGLREGTAKTALLYGHGLGAEVKGIGSDGALLSEANTWR
EEECCCCCCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCCEEECCCCEE
FASYGTTPLGSGWYVAPAILAQSSKDRYVKGDSYEWVTFNTRLIKEVTQNFALAFEGSYQ
EECCCCCCCCCCCCHHHHHHHCCCCCCEECCCCEEEEEECHHHHHHHHHCEEEEEECCEE
YMDLKPKGYQNHNAVNGSFYKLTFAPTLKANDINNFFSRPELRLFATWMDWSSKLDDFAS
EEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHC
NDAFGSSGFNTGGEWNFGVQMETWF
CCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1846143; 1649946; 9437428 [H]