| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is torA
Identifier: 218700491
GI number: 218700491
Start: 2201753
End: 2204299
Strand: Reverse
Name: torA
Synonym: ECIAI39_2157
Alternate gene names: 218700491
Gene position: 2204299-2201753 (Counterclockwise)
Preceding gene: 218700492
Following gene: 218700490
Centisome position: 42.95
GC content: 54.65
Gene sequence:
>2547_bases ATGAACAATAACGATCTCTTTCAGGCATCACGTCGGCGTTTTCTGGCACAACTCGGCGGCTTAACCGTCGCCGGGATGCT GGGGCCGTCATTGTTAACGCCGCGCCGTGCGACTGCGGCGCAAGCGGCGACTGAGGCTGTCATCTCGAAAGAGGGCATTC TTACCGGGTCGCACTGGGGGGCTATCCGCGCGACGGTGAAGGATGGTCGCTTTGTGGCGGCAAAACCGTTCGAACTGGAT AAATATCCGTCGAAAATGATCGCCGGATTGCCGGATCACGTACACAACGCGGCGCGTATTCGTTATCCGATGGTACGCGT GGACTGGCTACGTAAGCGCCATCTGAGCGACACCTCCCAGCGCGGTGATAACCGTTTTGTGCGCGTGAGCTGGGATGAAG CCCTCGACATGTTCTATGAAGAACTGGAACGCGTACAGAAAACTCACGGGCCGAGTGCCTTGCTGACCGCCAGTGGTTGG CAATCGACAGGGATGTTCCATAACGCTTCGGGGATGCTGGCGAAAGCTATTGCCTTGCATGGTAATAGCGTTGGTACGGG CGGAGATTACTCTACCGGTGCTGCGCAGGTGATCCTGCCGCGTGTGGTTGGCTCAATGGAAGTGTATGAACAGCAAACCT CCTGGCCGCTGGTATTGCAGAACAGCAAAACCATTGTGCTGTGGGGCTCTGATTTGCTGAAAAACCAGCAAGCGAACTGG TGGTGCCCGGATCACGATGTTTATGAATATTACGAGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAG CATCGATCCGGTTGTCACATCCACCCATGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTG ACGTGCCGCTGCAACTGGCGCTGGCGCATACGCTGTACAGTGAAAACCTGTACGACAAAAACTTCCTCACTAACTACTGT GTAGGTTTTGAGCAGTTCCTGACATATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCATGGGCAGAAAAACT GACCGGCATTGATGCCGAAACCATTCGTGGGATGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTGCTGGCTGGT GCGTGCAGCGTATGCAGCACGGTGAACAGTGGGCGTGTATGATTGTCGTTCTGGCGGCGATGCTGGGGCAAATTGGCCTG CCAGGTGGTGGCTTCGGTTTTGGCTGGCACTATAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTT CTCCGGCTCTACGTCGATTTCGCCTGTTCACGACAACAGTGATTACAAAGGTTACAGCAGCACCATTCCGATTGCCCGTT TTATCGATGCGATCCTCGAACCGGGAAAAGTGATCAACTGGAATGGTAAATCGGTAAAACTGCCACCGCTGAAAATGTGT ATTTTTGCCGGAACTAACCCGTTCCATCGTCATCAGCAGATTAACCGTATTATCGAAGGCTGGCGCAAGCTGGAAACGGT TATCGCCATAGATAACCAGTGGACCTCAACCTGCCGCTTTGCCGATATCGTACTGCCTGCGACCACGCAGTTTGAGCGTA ACGATCTCGACCAGTACGGTAACCACTCTAACCGTGGCATTATCGCCATGAAACAGGTCGTGCCGCCGCAGTTTGAGGCG CGCAACGACTTTGATATTTTCCGCGAGCTGTGCCGTCGCTTTAATCGCGAAGAAGCCTTTACCGAAGGGCTGGACGAAAT GGGCTGGCTGAAACGCATCTGGCAGGAAGGTGTACAACAGGGCAAAGGACGCGGCGTTCATCTGCCAGCGTTTGATGACT TCTGGAATAACAAAGAGTATGTCGAGTTTGACCATCCGCAGATGTTTGTTCGCCACCAGGCATTCCGCGAAGATCCGGAT CTCGAACCGCTGGGCACGCCGAGTGGCCTGATTGAGATCTACTCGAAAACCATCGCCGATATGAACTACGACGATTGTCA GGGGCATCCGATGTGGTTTGAGAAAATCGAACGCTCCCACGGCGGGCCCGGCTCGCAGAAGTATCCGTTGCATCTGCAAT CTGTGCATCCGGATTTCCGACTTCACTCGCAGTTATGTGAGTCGGAAACTCTGCGTCAGCAATATACGGTAGCGGGTAAA GAGCCAGTGTTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCG CGGTCAGGTGTTGGCTGGGGCAGTGGTTTCTGACCGCTATGCACCCGGCGTGGCACGAATTCATGAAGGGGCATGGTACG ATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAATCCCAACGTGTTGACCATTGACATCGGTACTTCG CAGTTGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTAACGGC GTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGTGAATATGTTCCCGCGTCGCAGGTGAAATCATGA
Upstream 100 bases:
>100_bases GCCTCGATAAACGTGAAGAACGCACCTTGTTGAAATATCTGCAAATGAATGCGTCTGATACCGCAGGTAAGGCTCACGGC GATAAGAAGGAAGAAAAATA
Downstream 100 bases:
>100_bases CCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTGGCGCAGTTGTTCTCCCGTGAACTGGACGATGAACAA CTGACGCAAATCGCCAGTGC
Product: trimethylamine N-oxide (TMAO) reductase I, catalytic subunit
Products: NA
Alternate protein names: TMAO reductase 1; Trimethylamine oxidase 1 [H]
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELD KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLTNYC VGFEQFLTYLLGEKDGQPKDAAWAEKLTGIDAETIRGMARQMAANRTQIIAGWCVQRMQHGEQWACMIVVLAAMLGQIGL PGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSISPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEA RNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPD LEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTS QLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
Sequences:
>Translated_848_residues MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELD KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLTNYC VGFEQFLTYLLGEKDGQPKDAAWAEKLTGIDAETIRGMARQMAANRTQIIAGWCVQRMQHGEQWACMIVVLAAMLGQIGL PGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSISPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEA RNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPD LEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTS QLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS >Mature_848_residues MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELD KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLTNYC VGFEQFLTYLLGEKDGQPKDAAWAEKLTGIDAETIRGMARQMAANRTQIIAGWCVQRMQHGEQWACMIVVLAAMLGQIGL PGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSISPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEA RNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPD LEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTS QLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787231, Length=848, Percent_Identity=99.0566037735849, Blast_Score=1752, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=828, Percent_Identity=44.0821256038647, Blast_Score=667, Evalue=0.0, Organism=Escherichia coli, GI145693196, Length=790, Percent_Identity=42.4050632911392, Blast_Score=609, Evalue=1e-175, Organism=Escherichia coli, GI87081797, Length=760, Percent_Identity=31.5789473684211, Blast_Score=300, Evalue=2e-82, Organism=Escherichia coli, GI1787870, Length=864, Percent_Identity=28.587962962963, Blast_Score=273, Evalue=3e-74, Organism=Escherichia coli, GI171474008, Length=751, Percent_Identity=29.4274300932091, Blast_Score=259, Evalue=6e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 - InterPro: IPR011887 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 94561; Mature: 94561
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWG CCCCHHHHHHHHHHHHHHCCCEEEHHCCCHHCCCCHHHHHHHHHHHHHHHCCEEECCCCC AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ EEEEEECCCEEEEECCCCCCCCHHHHHHCCCHHHCCHHHHCCCHHHHHHHHHHHCCCHHH RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHC GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECHHHHCCCCCCC WCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCHHHH LAHTLYSENLYDKNFLTNYCVGFEQFLTYLLGEKDGQPKDAAWAEKLTGIDAETIRGMAR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHH QMAANRTQIIAGWCVQRMQHGEQWACMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC GVILSGFSGSTSISPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEECCCEEEE IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG EEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCHHCHHHHC NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHH GKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD CCCCEEECCCHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE CCEEECCCCCCCCCCCCCCEEEEECCCCCEEECHHHHCCCCCCHHHHCCCCCCCCCCCCC PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEY CCCEEECCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCHHHHHHCCC VPASQVKS CCHHHCCC >Mature Secondary Structure MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWG CCCCHHHHHHHHHHHHHHCCCEEEHHCCCHHCCCCHHHHHHHHHHHHHHHCCEEECCCCC AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ EEEEEECCCEEEEECCCCCCCCHHHHHHCCCHHHCCHHHHCCCHHHHHHHHHHHCCCHHH RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHC GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECHHHHCCCCCCC WCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCHHHH LAHTLYSENLYDKNFLTNYCVGFEQFLTYLLGEKDGQPKDAAWAEKLTGIDAETIRGMAR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHH QMAANRTQIIAGWCVQRMQHGEQWACMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC GVILSGFSGSTSISPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEECCCEEEE IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG EEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCHHCHHHHC NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHH GKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD CCCCEEECCCHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE CCEEECCCCCCCCCCCCCCEEEEECCCCCEEECHHHHCCCCCCHHHHCCCCCCCCCCCCC PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEY CCCEEECCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCHHHHHHCCC VPASQVKS CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]