Click here to switch to the map view.

The map label for this gene is tfaE [H]

Identifier: 218700318

GI number: 218700318

Start: 2037048

End: 2037662

Strand: Reverse

Name: tfaE [H]

Synonym: ECIAI39_1974

Alternate gene names: 218700318

Gene position: 2037662-2037048 (Counterclockwise)

Preceding gene: 218700320

Following gene: 218700289

Centisome position: 39.7

GC content: 57.24

Gene sequence:

>615_bases
ATGAGTAACACTGCAGTTCTGGATGAAAACGGTATCGCCACTGTAGCGGGCGATATCACTGTATATCACTATGACGAGGA
AACCCGGGAATACACCTCATCCTCTGTGGAGTATCTCGCCCTTGGGGTGGGTACTCCGGCACATTCGTGCGCCGATGCAC
CGCCGGAGGCAATTTCGGGTTACGTGGTTTGCCGGACTGCCACGCTGAACGGGTGGGAGCATGTGCCTGATCACCGCGGC
GAGACGGTATACAGCACGGAGAACGGTAACCCCGTTCTGATTACCCAACCGGGTGATTACCCGGCGGACACCACCACAAA
ACAGCCAGCCACGCCATGGGATACCTGGAACGGTGAGGCGTGGGTAACCGATACTGAACGGCAGCGAGCCGCAGAACTGG
AGGTTGCCAGACAGCAACGCCAGCAACGGGTGAAACAGGCGATGGCGTCCGTCGATCTTATCAACCTCAAACTGCGTGCT
GGTCGCAGTCTGACACCAGAAGAAACGGCAAAACTGAACGCCGTGCTGGATTATATCGACGAGCTGAACGCACTGGATAT
CAGCACGGCACCTGAAATCAGCTGGCCGGAAGCGCCACTGGCACTTGCCAGTTGA

Upstream 100 bases:

>100_bases
TGCAGGCTACTATTCTGACCTCTATCAGAAGCGGGTATGCGAAGGGTATCACTGTCAGACCCCGTAGCATTGCACTTAAT
TACATTGTGAGGGCAGTTTA

Downstream 100 bases:

>100_bases
ACGGTATCACGCCGCCCTCACGATATAGTTAAACGCGATATTGCGGGGGCGGGTTATGTTAAAGAATGCTCCGTTTAATT
CGGCTTTTGCGCGACTGTTT

Product: putative tail fiber chaperone (assembly protein) from lambdoid prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSNTAVLDENGIATVAGDITVYHYDEETREYTSSSVEYLALGVGTPAHSCADAPPEAISGYVVCRTATLNGWEHVPDHRG
ETVYSTENGNPVLITQPGDYPADTTTKQPATPWDTWNGEAWVTDTERQRAAELEVARQQRQQRVKQAMASVDLINLKLRA
GRSLTPEETAKLNAVLDYIDELNALDISTAPEISWPEAPLALAS

Sequences:

>Translated_204_residues
MSNTAVLDENGIATVAGDITVYHYDEETREYTSSSVEYLALGVGTPAHSCADAPPEAISGYVVCRTATLNGWEHVPDHRG
ETVYSTENGNPVLITQPGDYPADTTTKQPATPWDTWNGEAWVTDTERQRAAELEVARQQRQQRVKQAMASVDLINLKLRA
GRSLTPEETAKLNAVLDYIDELNALDISTAPEISWPEAPLALAS
>Mature_203_residues
SNTAVLDENGIATVAGDITVYHYDEETREYTSSSVEYLALGVGTPAHSCADAPPEAISGYVVCRTATLNGWEHVPDHRGE
TVYSTENGNPVLITQPGDYPADTTTKQPATPWDTWNGEAWVTDTERQRAAELEVARQQRQQRVKQAMASVDLINLKLRAG
RSLTPEETAKLNAVLDYIDELNALDISTAPEISWPEAPLALAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787402, Length=199, Percent_Identity=59.2964824120603, Blast_Score=244, Evalue=3e-66,
Organism=Escherichia coli, GI1787637, Length=182, Percent_Identity=32.967032967033, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367120, Length=182, Percent_Identity=32.4175824175824, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 22257; Mature: 22125

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTAVLDENGIATVAGDITVYHYDEETREYTSSSVEYLALGVGTPAHSCADAPPEAISG
CCCCEEECCCCCEEEECCEEEEEECHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCC
YVVCRTATLNGWEHVPDHRGETVYSTENGNPVLITQPGDYPADTTTKQPATPWDTWNGEA
EEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
WVTDTERQRAAELEVARQQRQQRVKQAMASVDLINLKLRAGRSLTPEETAKLNAVLDYID
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
ELNALDISTAPEISWPEAPLALAS
HCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNTAVLDENGIATVAGDITVYHYDEETREYTSSSVEYLALGVGTPAHSCADAPPEAISG
CCCEEECCCCCEEEECCEEEEEECHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCC
YVVCRTATLNGWEHVPDHRGETVYSTENGNPVLITQPGDYPADTTTKQPATPWDTWNGEA
EEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
WVTDTERQRAAELEVARQQRQQRVKQAMASVDLINLKLRAGRSLTPEETAKLNAVLDYID
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
ELNALDISTAPEISWPEAPLALAS
HCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3894006; 9278503 [H]