| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218700289
Identifier: 218700289
GI number: 218700289
Start: 2012643
End: 2013119
Strand: Reverse
Name: 218700289
Synonym: ECIAI39_1944
Alternate gene names: NA
Gene position: 2013119-2012643 (Counterclockwise)
Preceding gene: 218700318
Following gene: 218700285
Centisome position: 39.23
GC content: 54.3
Gene sequence:
>477_bases ATGACGCACACACTGAATCCGGTCATCACTGTCACTGTGTCCGGTCCTGTGGGCAGCGGTAAAAGTTACGTACTGGCGCG GATAGAAGAGATGGTGAAACAGGAACTCGGAAACAGCGTCATTGTCGATGCTGCTGACGTGGAGAATGAGCGCCGTATGA ATGGCGAAGATCTGACGACCTGGCAGAAGCCACGGGGTGGCACAGTGATCAGGCTAGAGGAATACACGGGACAGGGCCTG TTGTCATACGGCGAGGAGCGTATCTGTCGGACGAATGAGCTGCTGGATGTTATATGCCCCACGGGCCGGCAACCCTGGAT ACTGCCCGATGCACTGCATGCCACCATTGCGGCACTGATGACAGTTTACGATCAGGAGCTGCTCATGAAGGAGTTACGTA AACTCACCGGTCAGCCAACAGAATGTTGTTCGTCTCCGAAGTACGGCAAACAGGAAAACGCCCCGGATAATCCTTAA
Upstream 100 bases:
>100_bases CACAAATACAGGGCGCAAAGGATTTTAAAGCGCGTTAAGAGAGCCGGGGATACGGGATGTGCAGGATAAACGATGAATTA TTCACAGAGGAGAATACGAT
Downstream 100 bases:
>100_bases GATACCTCCTGAACAGAAACAGCCCTGAAGGGCTGCACTAAAAAAAGAAGTGTATTATTGCCCAAACAGCTATAACGATG ATTCCCAGCCCAAGAGCCGA
Product: putative ABC transporter ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTHTLNPVITVTVSGPVGSGKSYVLARIEEMVKQELGNSVIVDAADVENERRMNGEDLTTWQKPRGGTVIRLEEYTGQGL LSYGEERICRTNELLDVICPTGRQPWILPDALHATIAALMTVYDQELLMKELRKLTGQPTECCSSPKYGKQENAPDNP
Sequences:
>Translated_158_residues MTHTLNPVITVTVSGPVGSGKSYVLARIEEMVKQELGNSVIVDAADVENERRMNGEDLTTWQKPRGGTVIRLEEYTGQGL LSYGEERICRTNELLDVICPTGRQPWILPDALHATIAALMTVYDQELLMKELRKLTGQPTECCSSPKYGKQENAPDNP >Mature_157_residues THTLNPVITVTVSGPVGSGKSYVLARIEEMVKQELGNSVIVDAADVENERRMNGEDLTTWQKPRGGTVIRLEEYTGQGLL SYGEERICRTNELLDVICPTGRQPWILPDALHATIAALMTVYDQELLMKELRKLTGQPTECCSSPKYGKQENAPDNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17502; Mature: 17371
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTLNPVITVTVSGPVGSGKSYVLARIEEMVKQELGNSVIVDAADVENERRMNGEDLTT CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHCCCCCCCCC WQKPRGGTVIRLEEYTGQGLLSYGEERICRTNELLDVICPTGRQPWILPDALHATIAALM CCCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TVYDQELLMKELRKLTGQPTECCSSPKYGKQENAPDNP HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure THTLNPVITVTVSGPVGSGKSYVLARIEEMVKQELGNSVIVDAADVENERRMNGEDLTT CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHCCCCCCCCC WQKPRGGTVIRLEEYTGQGLLSYGEERICRTNELLDVICPTGRQPWILPDALHATIAALM CCCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TVYDQELLMKELRKLTGQPTECCSSPKYGKQENAPDNP HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA