Definition Escherichia coli IAI39 chromosome, complete genome.
Accession NC_011750
Length 5,132,068

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The map label for this gene is 218699866

Identifier: 218699866

GI number: 218699866

Start: 1565465

End: 1566688

Strand: Direct

Name: 218699866

Synonym: ECIAI39_1492

Alternate gene names: NA

Gene position: 1565465-1566688 (Clockwise)

Preceding gene: 218699864

Following gene: 218699867

Centisome position: 30.5

GC content: 47.47

Gene sequence:

>1224_bases
ATGATCAAAGAGACTGTTACGATGAGTCATAAGGAACTCCACCGACTTCAGATTATTCAGGAACAAGCTGCGGCACGCAT
TGGCATTTCTATTCGGCAGGTTAAACGTCTGGTGCAACGGTATAGAAATGAAGGGCCTTCTGGTCTGGTTTCCCACCGAC
GTGGAAAGCGTCCTAATAATTCCTTTTCTACTGAATTCAGAGCAACAGTAATTTCACTCCTCAAAGGCCGTTACGCTGAT
TTTGGACCTACGTTTGCGTGCGAAAAATTGCGCGAGATACACGGTTTATCTTTATCCGTTGAAACTCTCAGAAAGTGGAT
GATAGAAGAGGGGTTATGGCGTGAACGCCGTCGTAAAATTGCCCGTATATATCAACGCCGCATGCGACGATCATCTTACG
GTGAACTGATCCAGATTGATGGCTCACCTCATGACTGGTTTGAAAATCGAGGCCCCAGATGTACACTGATCGTTTTCATT
GATGATGCCACCAGTGCGTTGATGGCGTTGCGTTTTGTGCCTGCTGAAACAACCCGGGCTTACATGGAAACCCTCCGGGG
TTACCTTAATGATCATGGCGTACCGCTCGCTCTCTACTCTGATAGACACAGTATATTCAGGGTAAATAACCCAGAGCGGG
AAGGTGAGCTGACCCAGTTCACTCGTGCGATAAAGACACTGGGCATCGAGCCAATCCATGCCAACAGCCCGCAGGCAAAA
GGGCGGGTAGAGCGCGCCAATCAGACACTACAGGACAGGCTGGTCAAAGAAATGCGGCTTCAGAATATCAGTGATATTGA
AACAGCAAATGCATGGTTGCCGACCTTTATTGAAGCCTATAACAACCGGTTCGCTACGTCGCCTCGTACTACTGATAATG
CTCATCTTGATGTGCACCATTCTGAAGAGGAACTGGGTTATATCTTCAGCCTACAGGCGAAGCGCGTTCTGTCTAAAAAT
CTCACTTTCCAGTACAAAAGCAGTGCGTTTCAGGTACGCAGTGAGGGTCGGGGATATCGACTTAGGCATTCGGTTGTTAC
TGTATGCGAGAACTTTGACGGTGAAATTAACGTTCTGTATGACGGGAAAGCGCTGGGCTGGGAAAAGTATGTTGATGGCC
CGGAGCCTATACCACTGGATGATGAAAAGAGTGTCCATGAACGAGTGGATAATGCCCGTATTGATTTACGCTCAAAATAC
TATGTTAAACCTAAAGCTGACTGA

Upstream 100 bases:

>100_bases
CCGAAAGGCACGGAGAAGCAGGCTATTGTTAACACCAAGCTGTAATGTCCCCTTTGAACCATTCTAAAATGTCCCCAGAC
AATTCTCTGGGGGATTTTTC

Downstream 100 bases:

>100_bases
GGTAGCCTGAGTTTAACGGACACTCCTTCCTGAAATAGAATGGCATCAGAAGGAGCTAATAATGAGCAGAAAAAACCAAC
GTTACTCTAAAGAGTTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNNSFSTEFRATVISLLKGRYAD
FGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKIARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFI
DDATSALMALRFVPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK
GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHHSEEELGYIFSLQAKRVLSKN
LTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKY
YVKPKAD

Sequences:

>Translated_407_residues
MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNNSFSTEFRATVISLLKGRYAD
FGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKIARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFI
DDATSALMALRFVPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK
GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHHSEEELGYIFSLQAKRVLSKN
LTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKY
YVKPKAD
>Mature_407_residues
MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNNSFSTEFRATVISLLKGRYAD
FGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKIARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFI
DDATSALMALRFVPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK
GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHHSEEELGYIFSLQAKRVLSKN
LTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKY
YVKPKAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 47174; Mature: 47174

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNN
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
SFSTEFRATVISLLKGRYADFGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKI
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
ARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFIDDATSALMALRFVPAETTRA
HHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHH
YMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK
HHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHH
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
SEEELGYIFSLQAKRVLSKNLTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLY
CHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEE
DGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKYYVKPKAD
CCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCEEEECCCCC
>Mature Secondary Structure
MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNN
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
SFSTEFRATVISLLKGRYADFGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKI
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
ARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFIDDATSALMALRFVPAETTRA
HHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHH
YMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK
HHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHH
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
SEEELGYIFSLQAKRVLSKNLTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLY
CHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEE
DGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKYYVKPKAD
CCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]