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The map label for this gene is ynfD

Identifier: 218699848

GI number: 218699848

Start: 1550634

End: 1550939

Strand: Reverse

Name: ynfD

Synonym: ECIAI39_1472

Alternate gene names: 218699848

Gene position: 1550939-1550634 (Counterclockwise)

Preceding gene: 218699850

Following gene: 218699847

Centisome position: 30.22

GC content: 56.54

Gene sequence:

>306_bases
ATGAAACTCTCAACCTGCTGTGCCGCGCTTCTGCTCGCCCTCGCCTCACCCGCGGTACTCGCCGCGCCGGGATCCTGTGA
GCGCATACAGAGCGATATATCACAGCGCATTATCAATAATGGCGTACCCGAAAGCAGCTTCACGTTAAGTATTGTACCCA
ATGACCAGGTTGATCAGCCTGATTCCCAGGTCGTCGGGCATTGCGCTAATGATACGCATAAAATTCTCTACACCCGCACC
ACCAGCGGTAACGTCTCTGCTCCCGCGCAGTCTACCCAGGATGGCGCGCCTGCCGAACCGCAGTAA

Upstream 100 bases:

>100_bases
ACCTGAGAGTAGAGATGATTCTCAATCATAGTAGCAAATACAGTACTTTACACGTTAAATGCTATGCTTAAAGAAGTTAT
CTTCGCGTAAGGAGCTTATG

Downstream 100 bases:

>100_bases
CACATTATCGACTGAACGCCGGATACGACACATCCGGCGATTTGAACATACAACATAATCCCACCTTATTACTCATACCC
TTCTATTGATATGGATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRT
TSGNVSAPAQSTQDGAPAEPQ

Sequences:

>Translated_101_residues
MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRT
TSGNVSAPAQSTQDGAPAEPQ
>Mature_101_residues
MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRT
TSGNVSAPAQSTQDGAPAEPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081940, Length=101, Percent_Identity=99.009900990099, Blast_Score=204, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010595
- ProDom:   PD336997 [H]

Pfam domain/function: PF06649 DUF1161 [H]

EC number: NA

Molecular weight: Translated: 10491; Mature: 10491

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQP
CCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
DSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDGAPAEPQ
HHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQP
CCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
DSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDGAPAEPQ
HHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]