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The map label for this gene is ybdF

Identifier: 218698951

GI number: 218698951

Start: 585190

End: 585558

Strand: Reverse

Name: ybdF

Synonym: ECIAI39_0554

Alternate gene names: 218698951

Gene position: 585558-585190 (Counterclockwise)

Preceding gene: 218698952

Following gene: 218698950

Centisome position: 11.41

GC content: 48.24

Gene sequence:

>369_bases
CTGCACGAAACGGCGAAACGCCTGGCTCTTGAGTTACCCTTTGTCGAGCTTTGCTGGCCTTTTGGCCCGGAGTTCGATGT
TTTTAAAATTGGCGGCAAGATTTTTATGCTGTCGTCGGAGCTGCGCGGCGTCCCCTTTATCAATCTGAAGTCCGATCCAC
AAAAATCCCTGCTAAATCAGCAAATATACCCAAGCATCAAGCCAGGGTATCACATGAATAAAAAGCACTGGATTTCGGTG
TATCCCGGCGAGGAAATCTCCGAAGCGTTACTTCGCGATCTGATCAACGATTCGTGGAATCTGGTGGTTGATGGTCTGGC
TAAACGCGATCAAAAAAGAGTGCGTCCTGACTCAACCGTAAATCAATAG

Upstream 100 bases:

>100_bases
TGGTTCTCGCTGGCGGATTAAACGTCGATTATCGCCGAACTTCGCGGCATACTTTGCTTATTCTCCTTCGCCTAAAGGAA
CGTTTATGGATAAGCAATCA

Downstream 100 bases:

>100_bases
CGCATTTTTCTCGCTTACCATTTCATCTCGATCCTTGTAATCTGCTGGCACGCAAAATTACTTTCACATGGAGTCTTTAT
GGATATCATTTCTGTCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISV
YPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPDSTVNQ

Sequences:

>Translated_122_residues
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISV
YPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPDSTVNQ
>Mature_122_residues
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISV
YPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPDSTVNQ

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=116, Percent_Identity=99.1379310344828, Blast_Score=240, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 14066; Mature: 14066

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQ
CCCHHHHHHHCCCHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCEEECCCCHHHHHHHH
QIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPDSTV
HCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCC
NQ
CC
>Mature Secondary Structure
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQ
CCCHHHHHHHCCCHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCEEECCCCHHHHHHHH
QIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPDSTV
HCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCC
NQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]