| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218698021
Identifier: 218698021
GI number: 218698021
Start: 4947716
End: 4948507
Strand: Reverse
Name: 218698021
Synonym: EC55989_4831
Alternate gene names: NA
Gene position: 4948507-4947716 (Counterclockwise)
Preceding gene: 218698028
Following gene: 218698020
Centisome position: 96.0
GC content: 48.61
Gene sequence:
>792_bases ATGAGCAACCCCATTTATCGTTCGGGGAAAGTGATAGCGGAGATGATTGAAATGAATAAGGTTATTGCGGTTTCAGCGCT TGCCATGGCAGGCATGTTTTCGACCCAGGCTCTGGCTGATGAAAGCAAAACAGGCTTTTATGTGACCGGTAAAGCAGGTG CTTCTGTTATGTCACTTGCAGACCAGCGTTTCCTGTCGGGGGATGGAGAGGAAACATCAAAATATAAAGGCGGTGATGGC CATGATACGGTATTCAGTGGCGGTATCGCGGCCGGTTATGATTTTTACCCGCAGTTCAGTATTCCGGTTCGTACGGAACT GGAGTTTTACGCTCGTGGAAAAGCTGATTCGAAGTATAACGTAGATAAAGACAGCTGGTCAGGCGGTTACTGGCGTGATG ACCTGAAGAATGAGGTGTCAGTCAACACACTGATGCTGAATGCGTACTATGACTTCCGGAATGACAGTGCATTCACACCA TGGGTATCTGCAGGGATTGGCTACGCCAGAATTCACCAGAAAACAACCGGTATCAGTACCTGGGATTATGGGTACGGAAG CAGTGGTCGCGAATCGTTGTCACGTTCAGGCTCTGCTGACAACTTCGCATGGAGCCTTGGCGCGGGTGTCCGCTATGACG TAACCCCGGATATCGCTCTGGACCTCAGCTATCGCTATCTTGATGCAGGTGATAGCAGTGTGAGTTACAAGGACGAGTGG GGCGATAAATATAAGTCAGAAGTTGATGTTAAAAGTCATGACATCCTGCTTGGTGTGACTTATAACTTCTGA
Upstream 100 bases:
>100_bases TTTATGGGTACGATAAGAAAACTTTATCGGGCACGATCGATTTTATCGATCGATTCGATCGAAAACATTCCTTTTACCTT ATCTTTTTCATGGTTTTAGA
Downstream 100 bases:
>100_bases CGACACTGCTCCTGAACGATAATACGTATATTTAGCAATTAAGATAATTGCGTATCTTCTGCAATTAAACAGAAATACCC TGCAGTCTATTACTGCAGGG
Product: exported surface protein precursor
Products: NA
Alternate protein names: Tia Invasion Determinant; Exported Surface Protein; Adhesin/Virulence Factor Hek; Outer Membrane Adhesin; Surface Antigen Msp4 Family Protein
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSNPIYRSGKVIAEMIEMNKVIAVSALAMAGMFSTQALADESKTGFYVTGKAGASVMSLADQRFLSGDGEETSKYKGGDG HDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTP WVSAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEW GDKYKSEVDVKSHDILLGVTYNF
Sequences:
>Translated_263_residues MSNPIYRSGKVIAEMIEMNKVIAVSALAMAGMFSTQALADESKTGFYVTGKAGASVMSLADQRFLSGDGEETSKYKGGDG HDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTP WVSAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEW GDKYKSEVDVKSHDILLGVTYNF >Mature_262_residues SNPIYRSGKVIAEMIEMNKVIAVSALAMAGMFSTQALADESKTGFYVTGKAGASVMSLADQRFLSGDGEETSKYKGGDGH DTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPW VSAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWG DKYKSEVDVKSHDILLGVTYNF
Specific function: Unknown
COG id: COG3637
COG function: function code M; Opacity protein and related surface antigens
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28906; Mature: 28775
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPIYRSGKVIAEMIEMNKVIAVSALAMAGMFSTQALADESKTGFYVTGKAGASVMSLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH DQRFLSGDGEETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYN HHHHHCCCCCCHHCCCCCCCCCCEEECCEECCCCCCCCCCCCEECCEEEEECCCCCCCCC VDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGIST CCCCCCCCCCCHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHCCCEEHEEHHHCCCCC WDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEW CCCCCCCCCHHHHHHCCCCCCEEEECCCCEEEECCCCEEEEEEEEEECCCCCCCCCCHHH GDKYKSEVDVKSHDILLGVTYNF CHHHHCCCCCCCCEEEEEEEECC >Mature Secondary Structure SNPIYRSGKVIAEMIEMNKVIAVSALAMAGMFSTQALADESKTGFYVTGKAGASVMSLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH DQRFLSGDGEETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYN HHHHHCCCCCCHHCCCCCCCCCCEEECCEECCCCCCCCCCCCEECCEEEEECCCCCCCCC VDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGIST CCCCCCCCCCCHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHCCCEEHEEHHHCCCCC WDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEW CCCCCCCCCHHHHHHCCCCCCEEEECCCCEEEECCCCEEEEEEEEEECCCCCCCCCCHHH GDKYKSEVDVKSHDILLGVTYNF CHHHHCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA