| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yjgX [H]
Identifier: 218698020
GI number: 218698020
Start: 4946043
End: 4947542
Strand: Reverse
Name: yjgX [H]
Synonym: EC55989_4830
Alternate gene names: 218698020
Gene position: 4947542-4946043 (Counterclockwise)
Preceding gene: 218698021
Following gene: 218698018
Centisome position: 95.98
GC content: 48.4
Gene sequence:
>1500_bases ATGAATATCAGAAAACTGTTTTGTCCGGGAAACACACCCCGGATTTTATTGTTTTTATTCTTTTTTGTTGTTTCTGCAAT AACCACAATTGCATGCGGATACACTGAGAAGAATGCCACAGGAAATGTGCTGCTTCTGTTTCTCCTTCTTCTCCTTGCAC ACAGAAATACCCTCACATCCATTACAGCGCTGTTATTTCTGTTCTGTTGTGCACTGTATGCGCCTGCGGGTATGACGTAC GGTAAAATCAACAACAGTTTTATTGTCGCGTTGCTGCAGACCACGGCTGATGAGGCTGCAGAGTTTACCGGGATGATTCC TGTTTATCATTTTCTGGTCAGTGCCGCGATTCTGGTATTCATGGTGATTTTCTGGCGGACACACCACCGCGGTCACCGTA ACTGGCTGGCACTGCTGCTATTCGTATTATGCTCTGTAAACAGCTGGCCGTTGCGGATGGTTAAAGGAACTGTTGTGGGG ACAACTGACACATTGCGTGAAATGCAGCGTTATAAACAACTGAGTCAGCACGGGGCTGATAACTGGAAAATCCTGCCGGG TGTGCCGTTGTATGACACGATTGTTATCGTTACTGGTGAGAGTGTGCGCAGGGATTATATGTCGGTATATGGCTATCCCG TGCCAACCACGCCGTGGCTGAATACTGCTCCCGGTTTATTTATTGACGTCTATACATCGACAGCAGCCAGTACCGTACCT TCCCTGAGCCGGACACTGATTTATGACTATGAGCAGAACCCTGACTCCGGCAACAACGTGGTGGCGCTGGCAGCAAAAGC AGGATACAGCACATGGTGGATATCCAATCAGGGAAAACTGGGAGAGCATGACACACGCATCTCTGTTATTGCTTCTGATG CGGAGCATACCGTTTTCCTCAAGAAAGGCAGCTTCGCTTCCCGTAAAACGGATGACATGTTGTTGTTACAGGAAACAGAA CGTGCGCTGGCGGATAAATCCTCGCCGAAGGTGATTTTCCTGCACATGATTGGCTCTCATCCGAATCCGTGTGACCGACT TAACTCCTGGCCGAATTATTACCTGGAGCAGTATCCCCGAAAGATTGCCTGTTACCTCGCCAGCATCAGTAAACTGGATA ACTTTCTCGGTCAGCTTGATGGTATCCTTCGCCGGCATTCCCGTCACTTTGCAATGCTTTACTTTTCTGACCATGGGCTG TCGGTCAGCGACAGTGCTAATCCTGTTCATCATGATGGTCATGTGCAGGGGGGCTACAGCGTTCCCCTGATTATTACCGC CAGTGACATCACGTCTCATCAGTCCGTCAGCAGGAAAATCAATGCCCGTAATTTCGCAGGCATTTTTCAGTGGCTGACCG GTATTCGTACCGAAAATATAACGCCATTCAATCCGCTGACAGACGAAGATAATGAACCCGTTATGGTTTTTAACGGAGAG AAAAATGTGCCGGCAGACAGTCTGAAACCGCAGCCACTTATTCTTCCGGACCACAGGTAA
Upstream 100 bases:
>100_bases AATACCCTGCAGTCTATTACTGCAGGGTTATCTGTTTCACAGATAATTTCTGATTTTTATTATCCTGTTCTCTTCATCAT AATGTTGTCGATATACTCCG
Downstream 100 bases:
>100_bases TCATATATGGCAAACTGTAATACAGTCTCTTGTACTGAAAAGGATTCTGTATAGAATAGAACCTGTATTCATATCAGCAC AAGGGACCACCAAATCCCGG
Product: Putative membrane-associated, metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MNIRKLFCPGNTPRILLFLFFFVVSAITTIACGYTEKNATGNVLLLFLLLLLAHRNTLTSITALLFLFCCALYAPAGMTY GKINNSFIVALLQTTADEAAEFTGMIPVYHFLVSAAILVFMVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVG TTDTLREMQRYKQLSQHGADNWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDVYTSTAASTVP SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHTVFLKKGSFASRKTDDMLLLQETE RALADKSSPKVIFLHMIGSHPNPCDRLNSWPNYYLEQYPRKIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGL SVSDSANPVHHDGHVQGGYSVPLIITASDITSHQSVSRKINARNFAGIFQWLTGIRTENITPFNPLTDEDNEPVMVFNGE KNVPADSLKPQPLILPDHR
Sequences:
>Translated_499_residues MNIRKLFCPGNTPRILLFLFFFVVSAITTIACGYTEKNATGNVLLLFLLLLLAHRNTLTSITALLFLFCCALYAPAGMTY GKINNSFIVALLQTTADEAAEFTGMIPVYHFLVSAAILVFMVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVG TTDTLREMQRYKQLSQHGADNWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDVYTSTAASTVP SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHTVFLKKGSFASRKTDDMLLLQETE RALADKSSPKVIFLHMIGSHPNPCDRLNSWPNYYLEQYPRKIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGL SVSDSANPVHHDGHVQGGYSVPLIITASDITSHQSVSRKINARNFAGIFQWLTGIRTENITPFNPLTDEDNEPVMVFNGE KNVPADSLKPQPLILPDHR >Mature_499_residues MNIRKLFCPGNTPRILLFLFFFVVSAITTIACGYTEKNATGNVLLLFLLLLLAHRNTLTSITALLFLFCCALYAPAGMTY GKINNSFIVALLQTTADEAAEFTGMIPVYHFLVSAAILVFMVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVG TTDTLREMQRYKQLSQHGADNWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDVYTSTAASTVP SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHTVFLKKGSFASRKTDDMLLLQETE RALADKSSPKVIFLHMIGSHPNPCDRLNSWPNYYLEQYPRKIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGL SVSDSANPVHHDGHVQGGYSVPLIITASDITSHQSVSRKINARNFAGIFQWLTGIRTENITPFNPLTDEDNEPVMVFNGE KNVPADSLKPQPLILPDHR
Specific function: Unknown
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787035, Length=513, Percent_Identity=30.0194931773879, Blast_Score=232, Evalue=5e-62, Organism=Escherichia coli, GI87082223, Length=247, Percent_Identity=31.1740890688259, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790392, Length=314, Percent_Identity=26.1146496815287, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 55849; Mature: 55849
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRKLFCPGNTPRILLFLFFFVVSAITTIACGYTEKNATGNVLLLFLLLLLAHRNTLTS CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH ITALLFLFCCALYAPAGMTYGKINNSFIVALLQTTADEAAEFTGMIPVYHFLVSAAILVF HHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHH MVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVGTTDTLREMQRYKQLSQHGAD HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECEEECCHHHHHHHHHHHHHHHCCCC NWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDVYTSTAASTVP CCEEECCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHTVFL HCHHEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEE KKGSFASRKTDDMLLLQETERALADKSSPKVIFLHMIGSHPNPCDRLNSWPNYYLEQYPR ECCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHH KIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGLSVSDSANPVHHDGHVQGGYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC VPLIITASDITSHQSVSRKINARNFAGIFQWLTGIRTENITPFNPLTDEDNEPVMVFNGE EEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC KNVPADSLKPQPLILPDHR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNIRKLFCPGNTPRILLFLFFFVVSAITTIACGYTEKNATGNVLLLFLLLLLAHRNTLTS CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH ITALLFLFCCALYAPAGMTYGKINNSFIVALLQTTADEAAEFTGMIPVYHFLVSAAILVF HHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHH MVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVGTTDTLREMQRYKQLSQHGAD HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECEEECCHHHHHHHHHHHHHHHCCCC NWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDVYTSTAASTVP CCEEECCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHTVFL HCHHEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEE KKGSFASRKTDDMLLLQETERALADKSSPKVIFLHMIGSHPNPCDRLNSWPNYYLEQYPR ECCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHH KIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGLSVSDSANPVHHDGHVQGGYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC VPLIITASDITSHQSVSRKINARNFAGIFQWLTGIRTENITPFNPLTDEDNEPVMVFNGE EEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCC KNVPADSLKPQPLILPDHR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]