| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yihV [H]
Identifier: 218697590
GI number: 218697590
Start: 4448110
End: 4449045
Strand: Reverse
Name: yihV [H]
Synonym: EC55989_4352
Alternate gene names: 218697590
Gene position: 4449045-4448110 (Counterclockwise)
Preceding gene: 218697601
Following gene: 218697589
Centisome position: 86.31
GC content: 49.68
Gene sequence:
>936_bases TTGACCGAAGACGACAAAATTAAACAGGACAAGACAAATATGACCAAAATTGCATGCGTGGGTATCACAGTTCAGGACAG GATTTATTCTTTGCTCACTCTGCCGGATGGCGGCGGAAAATATCAGGCAAATCATTATCTTGAGATTGGTGGCGGCCCGG CAGCAACAGCCGCTGTTGCAATCGCAAAGCTTGGCGTAGAGGTTGATTTCATCGGTCGCGTCGGCGATGACAGTTGTGGA AATACCTTACTTGCAGAACTTGAGGGTTGGGGCGTCAATACCGCATTTTGCCGCCGATATCCTAACGCCCGTTCATCGCA ATCAGCGATCCTCGTTGATCAGCATGGCGAACGGATTATCGTTAATTATCCAAGTCCCGATCTCGGTACTGATGCCGAAT GGTTAGAAGCGATCGATTTCTCTCGTTATGATCTGATTCTGGCCGATGTTCGCTGGCATAGCGGTACTGAAAAAGCATTC TCGCTAGCGCGTCTTGCGGGTGTGACAACGCTTTTAGACGCCGATATGACACCGCAGGATATTTCTCCACTTGTCGCGCT TGCCGATCACGCCGTGTTCTCAACACCAGGGCTGAAACGCATGACTGGCCTGCAGTCACCTGAAGAAGGTTTGTTCCAGG CAACGACACAAACAGCAGGTAAAGTGTATGTTACGCTGGGTTCTGAAGGATCGTTGTGGATTGAAGATGGTCATTTGTGT CAACAGGAGGCATTTTCTGTCAATGTGGTTGATACCACTGGAGCAGGCGATGTTTTTCACGGCGCACTCGCAGTAGCGTT GGCAGAAAAAATGCCAACAAAAGAGGCTATTCGTTTTGCCAGTGCGGTTGCCGCGATGAAATGTACCCAGCCTGGCGGTC GGGCCGGCATTCCTAATCGTGAGCAAACCGAATCATTTTTGTCACTTTATGCGTAA
Upstream 100 bases:
>100_bases GACAATTGAAAATTCGTTTTCGTCTGTTTTTGAGCATATTTGTAATTTATGTTCAAAAACACGACACGCATCACTAATTT GATCATTTGCGTCATTTAAA
Downstream 100 bases:
>100_bases AATGGTAAACATCTACCGAGGAGGGGCAAGGGAGTATTCATGAGTATCATCGAAGTGACAGGTAATCCACGCCATGACCA ACTCGTTCATCTAATCGCAG
Product: putative sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTEDDKIKQDKTNMTKIACVGITVQDRIYSLLTLPDGGGKYQANHYLEIGGGPAATAAVAIAKLGVEVDFIGRVGDDSCG NTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQHGERIIVNYPSPDLGTDAEWLEAIDFSRYDLILADVRWHSGTEKAF SLARLAGVTTLLDADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLC QQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNREQTESFLSLYA
Sequences:
>Translated_311_residues MTEDDKIKQDKTNMTKIACVGITVQDRIYSLLTLPDGGGKYQANHYLEIGGGPAATAAVAIAKLGVEVDFIGRVGDDSCG NTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQHGERIIVNYPSPDLGTDAEWLEAIDFSRYDLILADVRWHSGTEKAF SLARLAGVTTLLDADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLC QQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNREQTESFLSLYA >Mature_310_residues TEDDKIKQDKTNMTKIACVGITVQDRIYSLLTLPDGGGKYQANHYLEIGGGPAATAAVAIAKLGVEVDFIGRVGDDSCGN TLLAELEGWGVNTAFCRRYPNARSSQSAILVDQHGERIIVNYPSPDLGTDAEWLEAIDFSRYDLILADVRWHSGTEKAFS LARLAGVTTLLDADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLCQ QEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNREQTESFLSLYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=288, Percent_Identity=27.0833333333333, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI5670342, Length=288, Percent_Identity=23.9583333333333, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87082343, Length=297, Percent_Identity=67.003367003367, Blast_Score=392, Evalue=1e-110, Organism=Escherichia coli, GI1790193, Length=303, Percent_Identity=28.0528052805281, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081971, Length=280, Percent_Identity=24.6428571428571, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17532905, Length=306, Percent_Identity=29.0849673202614, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24662680, Length=296, Percent_Identity=23.9864864864865, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583886, Length=291, Percent_Identity=24.7422680412371, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 33229; Mature: 33098
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDDKIKQDKTNMTKIACVGITVQDRIYSLLTLPDGGGKYQANHYLEIGGGPAATAAVA CCCCCCCCCCCCCCEEEEEEEEEEHHCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHH IAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQHGERII HHHHCCEEEEEECCCCCCCCCCEEEHHCCCCCCHHHHHCCCCCCCCCCEEEEECCCCEEE VNYPSPDLGTDAEWLEAIDFSRYDLILADVRWHSGTEKAFSLARLAGVTTLLDADMTPQD EECCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHH ISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLC HHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCC QQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNR HHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH EQTESFLSLYA HHHHHHHHHCC >Mature Secondary Structure TEDDKIKQDKTNMTKIACVGITVQDRIYSLLTLPDGGGKYQANHYLEIGGGPAATAAVA CCCCCCCCCCCCCEEEEEEEEEEHHCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHH IAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQHGERII HHHHCCEEEEEECCCCCCCCCCEEEHHCCCCCCHHHHHCCCCCCCCCCEEEEECCCCEEE VNYPSPDLGTDAEWLEAIDFSRYDLILADVRWHSGTEKAFSLARLAGVTTLLDADMTPQD EECCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHH ISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLC HHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCC QQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNR HHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH EQTESFLSLYA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]