| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218696250
Identifier: 218696250
GI number: 218696250
Start: 2989969
End: 2990850
Strand: Reverse
Name: 218696250
Synonym: EC55989_2915
Alternate gene names: NA
Gene position: 2990850-2989969 (Counterclockwise)
Preceding gene: 218696253
Following gene: 218696249
Centisome position: 58.02
GC content: 33.33
Gene sequence:
>882_bases ATGAAGGATGTGAGTGCGAATTTTTTTGATGATTTCTATCTGCAAGTTTGTACCGCTTGTGAGGACAAACTTCTTGAGCT GGAATGGAAACTTGAAGTCGAAAAAAAGGAGAGCAACCAGGATGTTCTGCGCACTTACAGGCAAAGAGCCTATGATAAAA TTGAAGAATTTAAAATTATTGAGTATTCAAAAATACAATGTCAATATTTTGTAGATATGACTAATAGCGACAATATACGC TACTCACAAGAGTTTATAAATGTTGATGGAATAATGGTTGAGAAACCTTTTATTTATAAGGAAACATATGCAGAATATCG GATTGAAATTCGAGGAAAAATGGACGGGTATAAACTGACAGGATTAGCAAGACTATATGATGCACATTATGAATATATAT ATCTATCTATGGCTTTAGAAGATTTTTACTGGGCGCAGTTCCAATATTCATTGGGCAATAAAAAAGAAAGTTGTAAGTTT CTTCTTGATGCTTATTCTTATATGAATGTCTGTATTTCGCGAGATGATAACCGAGACTTACCGAGTTTTTATCGATTAAG AAGTGGTTTTGATAAAGTATGCAGAAGAGCGCGCTCAAGCGCTGGAGGGAAAAATAAACTTGCAGAACTTGAATATATTA AAGATACAGTTGTTATCTTACTTGAAGATATTCCTTCACATAGCGACTGGAAAAATAAACGTCAACTTCTTGAATATTTA ATGCCATATATTTGTAATAATGATAAAAAGGTCAATCCAGATAAATGGATAAATGATACAGGCGATAGAGAGGAAACTAT CCGCCGCAGACTTAATAAATGGTCTACAGGTGATCTAAAAGTAGAGATTGATAAAGTCCTAAAGAACAATACTAACAATT AA
Upstream 100 bases:
>100_bases GTATGAGTTTGTTCAGGTGGGTCCATATTGCCAACCACGCTGGGGCTGTCATACACTGGAAGTAACATTAAAATAAAATC ACTTTAGGGATTTACTTTTC
Downstream 100 bases:
>100_bases TATTATTATGGTTTTGATATTTTTATGTCTATCAGGAGGGCTACTATACGATCAGTCTTGATGGGTTTGAAATTACATCG CTATGAAAATACCCCACATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKDVSANFFDDFYLQVCTACEDKLLELEWKLEVEKKESNQDVLRTYRQRAYDKIEEFKIIEYSKIQCQYFVDMTNSDNIR YSQEFINVDGIMVEKPFIYKETYAEYRIEIRGKMDGYKLTGLARLYDAHYEYIYLSMALEDFYWAQFQYSLGNKKESCKF LLDAYSYMNVCISRDDNRDLPSFYRLRSGFDKVCRRARSSAGGKNKLAELEYIKDTVVILLEDIPSHSDWKNKRQLLEYL MPYICNNDKKVNPDKWINDTGDREETIRRRLNKWSTGDLKVEIDKVLKNNTNN
Sequences:
>Translated_293_residues MKDVSANFFDDFYLQVCTACEDKLLELEWKLEVEKKESNQDVLRTYRQRAYDKIEEFKIIEYSKIQCQYFVDMTNSDNIR YSQEFINVDGIMVEKPFIYKETYAEYRIEIRGKMDGYKLTGLARLYDAHYEYIYLSMALEDFYWAQFQYSLGNKKESCKF LLDAYSYMNVCISRDDNRDLPSFYRLRSGFDKVCRRARSSAGGKNKLAELEYIKDTVVILLEDIPSHSDWKNKRQLLEYL MPYICNNDKKVNPDKWINDTGDREETIRRRLNKWSTGDLKVEIDKVLKNNTNN >Mature_293_residues MKDVSANFFDDFYLQVCTACEDKLLELEWKLEVEKKESNQDVLRTYRQRAYDKIEEFKIIEYSKIQCQYFVDMTNSDNIR YSQEFINVDGIMVEKPFIYKETYAEYRIEIRGKMDGYKLTGLARLYDAHYEYIYLSMALEDFYWAQFQYSLGNKKESCKF LLDAYSYMNVCISRDDNRDLPSFYRLRSGFDKVCRRARSSAGGKNKLAELEYIKDTVVILLEDIPSHSDWKNKRQLLEYL MPYICNNDKKVNPDKWINDTGDREETIRRRLNKWSTGDLKVEIDKVLKNNTNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35069; Mature: 35069
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDVSANFFDDFYLQVCTACEDKLLELEWKLEVEKKESNQDVLRTYRQRAYDKIEEFKII CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEE EYSKIQCQYFVDMTNSDNIRYSQEFINVDGIMVEKPFIYKETYAEYRIEIRGKMDGYKLT EECEEEEEEEEEECCCCCCEEHHHHCCCCCEEECCCCHHHHHHHEEEEEEEECCCCEEHH GLARLYDAHYEYIYLSMALEDFYWAQFQYSLGNKKESCKFLLDAYSYMNVCISRDDNRDL HHHHHHHHHHHEEEEEEHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PSFYRLRSGFDKVCRRARSSAGGKNKLAELEYIKDTVVILLEDIPSHSDWKNKRQLLEYL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH MPYICNNDKKVNPDKWINDTGDREETIRRRLNKWSTGDLKVEIDKVLKNNTNN HHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCC >Mature Secondary Structure MKDVSANFFDDFYLQVCTACEDKLLELEWKLEVEKKESNQDVLRTYRQRAYDKIEEFKII CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEE EYSKIQCQYFVDMTNSDNIRYSQEFINVDGIMVEKPFIYKETYAEYRIEIRGKMDGYKLT EECEEEEEEEEEECCCCCCEEHHHHCCCCCEEECCCCHHHHHHHEEEEEEEECCCCEEHH GLARLYDAHYEYIYLSMALEDFYWAQFQYSLGNKKESCKFLLDAYSYMNVCISRDDNRDL HHHHHHHHHHHEEEEEEHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PSFYRLRSGFDKVCRRARSSAGGKNKLAELEYIKDTVVILLEDIPSHSDWKNKRQLLEYL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH MPYICNNDKKVNPDKWINDTGDREETIRRRLNKWSTGDLKVEIDKVLKNNTNN HHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA