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The map label for this gene is ninB [H]

Identifier: 218695982

GI number: 218695982

Start: 2694256

End: 2694666

Strand: Reverse

Name: ninB [H]

Synonym: EC55989_2630

Alternate gene names: 218695982

Gene position: 2694666-2694256 (Counterclockwise)

Preceding gene: 218695983

Following gene: 218695981

Centisome position: 52.27

GC content: 48.42

Gene sequence:

>411_bases
GTGAAGCAAACAATATTCCTCCGAACTAAGCAACAACAGCAAGCCGCAATCAACGCCATCCTCGCAACACCACTCGATAA
AGACAAGCCAGTTACCATCCGCATTACTGACTACAAGCGCAATCTTGACCAGAACGCAAAATTTCACGCGATGGTCGCAG
ATATCGCTAGGCAAGTTCAGTGGCGCGATAAATGGTTAAAACCGGAACAATGGAAGGTTTTGTTGATCAGCGGTCATGCA
GTGGCAACAAAACAGGAAGCTGATGTTTTGCCCGGGCTTGAAGGCGAATACGTCAACATTCGCGAAAGTAGCGCGCAGAT
GAGTGTGAAGCGTATGGCAAGTCTGATTGAGTACACGACAGCATGGGCTATTGGTCAGGGTGTCAGATTTACCGACAGGA
GGTACGAATGA

Upstream 100 bases:

>100_bases
AATATCTCATTGTAATGTTCTTTCCTTTGTTTCTTGGGTGGTACGCCGCAAGGTTGCTGGAAGAATGGGGTTACAGGCAT
AAAAAATAAAGGAGTGTTCA

Downstream 100 bases:

>100_bases
GACGACAGCGACGAAGCATCACCGACATCATCTGCGAAAACTGCAAATACCTTCCAACGAAACGCTCCAGAAATAAACGC
AAGCCAATCCCAAAAGAATC

Product: putative ninB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKQTIFLRTKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMVADIARQVQWRDKWLKPEQWKVLLISGHA
VATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTTAWAIGQGVRFTDRRYE

Sequences:

>Translated_136_residues
MKQTIFLRTKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMVADIARQVQWRDKWLKPEQWKVLLISGHA
VATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTTAWAIGQGVRFTDRRYE
>Mature_136_residues
MKQTIFLRTKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMVADIARQVQWRDKWLKPEQWKVLLISGHA
VATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTTAWAIGQGVRFTDRRYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 15687; Mature: 15687

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTIFLRTKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMVADIARQVQ
CCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
WRDKWLKPEQWKVLLISGHAVATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTT
HHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
AWAIGQGVRFTDRRYE
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKQTIFLRTKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMVADIARQVQ
CCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
WRDKWLKPEQWKVLLISGHAVATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTT
HHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
AWAIGQGVRFTDRRYE
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]