Definition Escherichia coli 55989, complete genome.
Accession NC_011748
Length 5,154,862

Click here to switch to the map view.

The map label for this gene is ninF

Identifier: 218695981

GI number: 218695981

Start: 2693910

End: 2694080

Strand: Reverse

Name: ninF

Synonym: EC55989_2629

Alternate gene names: NA

Gene position: 2694080-2693910 (Counterclockwise)

Preceding gene: 218695982

Following gene: 218695980

Centisome position: 52.26

GC content: 49.71

Gene sequence:

>171_bases
GTGATTGACCCAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCA
TATGCTGGAAGTTCACGTGTGCTCCGATTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGTACGAGGAAGAAG
ACGATGAATGA

Upstream 100 bases:

>100_bases
AACGCAAGCCAATCCCAAAAGAATCTGACGTAAAAACCTTCAATTACACAGCTCACCTGTGGGATATCCGGTGGCTTAGA
GAACGTGCGAGGAAAACAAG

Downstream 100 bases:

>100_bases
GTTAATAAATGGCAATGCCATCAAAATGACAAGCATTGAAATCGCTGAGTTGGTGGGTAAGCGTCATGACAATGTGAAAC
GTACCATCGAAACGCTGGCT

Product: conserved hypothetical protein from phage origin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MIDPNRSYEQESVERALTCANCGQKLHMLEVHVCSDCCAELMSDPNSSMYEEEDDE

Sequences:

>Translated_56_residues
MIDPNRSYEQESVERALTCANCGQKLHMLEVHVCSDCCAELMSDPNSSMYEEEDDE
>Mature_56_residues
MIDPNRSYEQESVERALTCANCGQKLHMLEVHVCSDCCAELMSDPNSSMYEEEDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6387; Mature: 6387

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.9 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
16.1 %Cys+Met (Translated Protein)
8.9 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
16.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPNRSYEQESVERALTCANCGQKLHMLEVHVCSDCCAELMSDPNSSMYEEEDDE
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDPNRSYEQESVERALTCANCGQKLHMLEVHVCSDCCAELMSDPNSSMYEEEDDE
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA