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The map label for this gene is yfcU [H]

Identifier: 218695937

GI number: 218695937

Start: 2651339

End: 2653981

Strand: Reverse

Name: yfcU [H]

Synonym: EC55989_2582

Alternate gene names: 218695937

Gene position: 2653981-2651339 (Counterclockwise)

Preceding gene: 218695938

Following gene: 218695936

Centisome position: 51.49

GC content: 51.15

Gene sequence:

>2643_bases
ATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGT
CTGGGCTGAAGACGACATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACAAAAATTGATCTGAAGCGTTTTT
CCAGCCAGGGATATGTTGAGCCCGGAAAATACAATTTACAGGTTCAACTAAATAAACAGCCATTGGCGGAAGAGTACGAT
ATTTACTGGTATGCTGGTGAAGATGACGCGAGCAAAAGCTATGCTTGTCTGACACCGGAACTGGTAGCGCAGTTTGGTTT
AAAAGAAGACGTGGCGAACAATCTGCAATGGAGCCACGATGCTAAATGCCTGAAATCCGGTCAACTGGAAGGCATGGAAA
TTAAGGCTGATTTAAGCCAGTCCGCATTAGTCATTTCACTGCCACAGGCTTACCTCGAATATACTTATCCCGACTGGGAT
CCGCCTTCACGTTGGGATGACGGCATCTCCGGGATCGTCGCGGACTACAGCATCAACGCACAAACCCGGCACGAAGAAAA
TGGCGGTGATGATAGTAACGAGATCAGCGGCAACGGGACGGTCGGGGTTAACCTGGGGCCGTGGCGTATGCGTGCTGACT
GGCAGACTAACTATCAACATACTCGCAGTAATGATGACGATGAATTCAGCGGCGATGAAACTCAAAAAAAATGGGAGTGG
AGTCGCTACTATGCCTGGCGGGCGTTACCATCATTAAAAGCCAAACTGGCGCTGGGCGAGGATTACCTCAGATCCGATAT
TTTTGATGGTTTTAACTATGTTGGTGGCAGTGTCAGTACTGACGATCAAATGTTGCCTCCCAATCTGCGCGGCTACGCGC
CAGACATTTCCGGCGTGGCACACACCACAGCAAAAGTGACCGTCAGCCAGATGGGGCGTGTGATTTACGAAACGCAGGTT
CCGGCTGGACCGTTTCGTATTCAGGATCTTGGTGATTCTGTCTCCGGTACGTTGCATATTCGCATTGAAGAACAGAACGG
CCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTCACTCGCCCAGGTCAGGTTCGCTATAAGATCATGA
TGGGCCGTCCGCAAGAGTGGGGACACCATGTCGAGGGTGAATTTTTTTCTGGTGCTGAAGCTTCCTGGGGGATCGCTAAC
GGCTGGTCGTTATATGGCGGCGCACTGGGAGATGAAAACTATCAGTCTGCGGCGCTTGGCGTCGGTCGCGATTTGTCTAC
ATTCGGCGCGGTCGCGTTTGATGTTACTCACTCGCACACCAAACTGGATAAAGACACCGCTTATGGCAAAGGTTCGCTGG
ACGGTAACTCCTTCCGTGTGAGTTATTCCAAAGACTTTGACCAGCTCAACAGCCGCGTTACTTTTGCTGGATATCGCTTC
TCGGAAGAGAACTTTATGACCATGAGTGAGTATCTGGATGCCAGTGACAGCGGAATGGTACGCACGGGCAACGACAAAGA
GATGTACACCGCCACTTATAACCAGAACTTCCGCGATGCGGGTGTTTCGGTTTATCTCAACTATACCCGCCATACCTACT
GGGATCGCGAGGAGCAGACAAACTACAACATCATGCTCTCGCACTATTTCAATATGGGCAGTATTCGTAATGTCAGCATC
TCGATGACTGGCTACCGTTACGAGTATGACAACCAGGCCGACAAAGGCATGTACATTTCGCTCAGTATGCCGTGGGGCGA
CAACAGTACCGTTAGCTATAACGGTAACTATGGCAGTGGGACGGACAGCAGTCAGGTCGGTTATTTCAGCCGTGTCGATG
ACGCGACTCACTATCAGTTGAACGTCGGCACCAGTGACAAACACACCAGCGTTGACGGCTATTACAGCCATGATGGTTCG
CTGGCGCAGGTTGACCTCAGTGCGAACTACCATGAAGGGCAATACACCTCTGCGGGCTTGTCGTTACAGGGCGGCGCAAC
GCTTACTGCCCACGGTGGCGCACTTCACCGTACCCAGAATATGGGCGGGACACGCTTGTTGATTGATGCCGATGGCGTTG
CCGATGTTCCGGTGGAAGGTAACGGGGCTGCTGTTTATACCAATATGTTTGGTAAAGCCGTCGTTTCTGACGTCAATAAC
TATTACCGCAATCAGGCGTATATCGACCTCAACAGATTGCCTGAAAACGCTGAAGCAACCCAGTCGGTGGTGCAAGCCAC
GCTAACTGAAGGTGCCATTGGCTACCGCAAATTTGCCGTCATCAGTGGTCAAAAAGCGATGGCGGTGCTGCGTTTACAAG
ACGGCAGCCATCCTCCGTTTGGCGCAGAAGTAAAAAATGATAACGAGCAGACAGTGGGCCTTGTCGATGATGACGGCAAT
GTTTATCTGGCTGGGGTGAAACCTGGCGAACACATGAGTGTGTTCTGGAGTGGTGTTGCGCATTGCGATATCAACCTGCC
GGACCCGCTGCCTGCCGATCTGTTTAACGGCTTGTTACTGCCATGCCAGCATAAAGGCAACGTCGCGCCGGTTGTTCCTG
ATGACATAAAGCCTGTCATTCAGGAGCAGACGCAACAGGTGACACCCACCAATCCCCCTGTTTCTGTTTCAGCTAACCAA
TAA

Upstream 100 bases:

>100_bases
CCAGATTACTTACCTGTAAGGCATACCCCCATAGCGACACTGCTATGGGGGATTTAAATGGATTTTGACCGAACAAGAAT
AAAAACGGATAGAAACGTGT

Downstream 100 bases:

>100_bases
CGTGATTAAGGAATGATCCATGTCTGATTTACTTTGCTCTGCCAAATTGGGTGCTACGACGCTAGCGTTACTGCTTAGCG
CTGCCAGTTTGTCTGCCCAG

Product: putative outer membrane usher protein yfcU precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 880; Mature: 879

Protein sequence:

>880_residues
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYD
IYWYAGEDDASKSYACLTPELVAQFGLKEDVANNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEW
SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQV
PAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIAN
GWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRF
SEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVSI
SMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGS
LAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNN
YYRNQAYIDLNRLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDDGN
VYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPVVPDDIKPVIQEQTQQVTPTNPPVSVSANQ

Sequences:

>Translated_880_residues
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYD
IYWYAGEDDASKSYACLTPELVAQFGLKEDVANNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEW
SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQV
PAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIAN
GWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRF
SEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVSI
SMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGS
LAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNN
YYRNQAYIDLNRLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDDGN
VYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPVVPDDIKPVIQEQTQQVTPTNPPVSVSANQ
>Mature_879_residues
PDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDI
YWYAGEDDASKSYACLTPELVAQFGLKEDVANNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWDP
PSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEWS
RYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVP
AGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIANG
WSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRFS
EENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVSIS
MTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSL
AQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNY
YRNQAYIDLNRLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDDGNV
YLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPVVPDDIKPVIQEQTQQVTPTNPPVSVSANQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=849, Percent_Identity=35.1001177856302, Blast_Score=496, Evalue=1e-141,
Organism=Escherichia coli, GI1790772, Length=888, Percent_Identity=26.5765765765766, Blast_Score=283, Evalue=3e-77,
Organism=Escherichia coli, GI1787172, Length=866, Percent_Identity=27.3672055427252, Blast_Score=275, Evalue=1e-74,
Organism=Escherichia coli, GI1789533, Length=862, Percent_Identity=27.3781902552204, Blast_Score=273, Evalue=4e-74,
Organism=Escherichia coli, GI1786332, Length=860, Percent_Identity=28.4883720930233, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI1786744, Length=856, Percent_Identity=26.4018691588785, Blast_Score=246, Evalue=5e-66,
Organism=Escherichia coli, GI1788427, Length=773, Percent_Identity=25.0970245795602, Blast_Score=213, Evalue=4e-56,
Organism=Escherichia coli, GI1789610, Length=852, Percent_Identity=22.3004694835681, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 97414; Mature: 97283

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00133 CARBOXYPEPT_ZN_2 ; PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVE
CCCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCEEEHEECCCCCCCC
PGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELVAQFGLKEDVANNLQWSHD
CCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHCCCHHHHHHCCCCCCC
AKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWDPPSRWDDGISGIVADYSINA
HHHHHCCCCCCEEEEECCCCCEEEEEECHHHHEECCCCCCCCCCCCCCCCCEEEEEEECC
QTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEW
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVA
HHEEEECCCCCHHEEEECCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
HTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMP
HHHHEEEHHHCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCC
YLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIANGWSLYGGALGDENYQSAALG
CEECCCCEEEEEEECCCHHHCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHC
VGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRF
CCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCEEEEEEEEE
SEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQT
CCCCCEEHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCEECCCCCCC
NYNIMLSHYFNMGSIRNVSISMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSG
CCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCC
TDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGL
CCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCEEECCE
SLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNN
EECCCEEEEECCCEEEEECCCCCEEEEEECCCCEECCCCCCCCEEEECHHHHHHHHHHHH
YYRNQAYIDLNRLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPF
HHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCC
GAEVKNDNEQTVGLVDDDGNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLL
CCEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCHHHHCCCEE
PCQHKGNVAPVVPDDIKPVIQEQTQQVTPTNPPVSVSANQ
EECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCC
>Mature Secondary Structure 
PDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVE
CCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCEEEHEECCCCCCCC
PGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELVAQFGLKEDVANNLQWSHD
CCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHCCCHHHHHHCCCCCCC
AKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWDPPSRWDDGISGIVADYSINA
HHHHHCCCCCCEEEEECCCCCEEEEEECHHHHEECCCCCCCCCCCCCCCCCEEEEEEECC
QTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEW
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVA
HHEEEECCCCCHHEEEECCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
HTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMP
HHHHEEEHHHCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCC
YLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIANGWSLYGGALGDENYQSAALG
CEECCCCEEEEEEECCCHHHCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHC
VGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRF
CCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCEEEEEEEEE
SEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQT
CCCCCEEHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCEECCCCCCC
NYNIMLSHYFNMGSIRNVSISMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSG
CCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCC
TDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGL
CCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCEEECCE
SLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNN
EECCCEEEEECCCEEEEECCCCCEEEEEECCCCEECCCCCCCCEEEECHHHHHHHHHHHH
YYRNQAYIDLNRLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPF
HHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCC
GAEVKNDNEQTVGLVDDDGNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLL
CCEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCEEEEECCCCCCCCHHHHCCCEE
PCQHKGNVAPVVPDDIKPVIQEQTQQVTPTNPPVSVSANQ
EECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]