| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is chbC [H]
Identifier: 218695073
GI number: 218695073
Start: 1739926
End: 1741287
Strand: Reverse
Name: chbC [H]
Synonym: EC55989_1671
Alternate gene names: 218695073
Gene position: 1741287-1739926 (Counterclockwise)
Preceding gene: 218695074
Following gene: 218695072
Centisome position: 33.78
GC content: 42.29
Gene sequence:
>1362_bases TTGGGATGTATAAATATCCAAAACAACAGGTATAAAAAAATGGGATTAATGGCCTCATTCGAACGTGGAATGGAACGTTT TCTTGTTCCAGTTGCTATCAAGTTAAACTCACAAAAACATGTTGCAGCGGTGAGAGATGGATTCGTTTTTACGTTTCCAA TTATCATGGCAAGTTCATTAATTATATTAATTAACTTTGCCATATTATCGCCAGACGGTTTTATTGCCGGATTACTGCAT CTGAATAGCATTTTCCCCAACCTTGAAAAAGCACAAGCTATTTTTACTCCGGTAATGAATGGTTCTGTAAATATCATGTC AATTATGATTGCTTTCCTGGTCGCCAGGAATATGGCGATTAGCTATGAGCAAGATGATCTTTTATGCGGATTAACGGCAA TAGGAGCATTTTTTATTGTTTATACGCCATATCAGATGATAGATGGGCAAGCATTCCTGACGACCAAATATCTCGGCGCG CAGGGGTTGTTTGTTGCTGTTATCGTTGCATTGATCACCAGTGAAATATTTTGTCGCTTAGCTCGAAACCCAAAAATCAC CATAACGATGCCGGCAGCTGTACCGCCTGCGGTAGCGCGTTCATTTAAAGTTTTATTGCCAATATTTTTTGTCATGGTGT TCTTTTCCGCACTTAATTATTGCCTGACACTGATATCCCCGGCAGGACTAAACGATCTTATTTACACATTAATCCAGACG CCGCTCAAACATATGGGAACGAATATCTTTGCGGTAATTATCCTGGGGGCTGTGGGTAATTTCCTGTGGGTGCTGGGGAT CCACGGACCTAATACCACATCGGCAATTCGAGAAACCGTTTTTTCTGAGGCTAATCTGGAGAATCTCTCCTGGGCCGCTC AACATGGCACTACCTGGGGCGCGCCATATCCGATTACCTGGACTTCTATTAATGATGCATTTGCCAACTGCGGCGGTTCA GGTATGACGTTGGGGTTATTGTTGGCTATTTTTATCGCTTCTAAGCGTGCGGAATACCGTGATCTGGCAAAAATGTCATT TATCCCCGGTATTTTCAATATCAATGAACCGATAATGTTTGGCCTTCCTATTGTACTTAACCCCATCATGATGGTGCCGT TTATTATGGTTCCCATTGTTAACTGTGCCATTGGTTACTTCTTTATTTCGATGGAAATTATTCCACCGGTTGCTTATGCC GTGCCCTGGACTACGCCCGGACCTTTAATTGCTTTCCTCGGAACCGGGGGGAACTGGCTGGCTTTACTGGTTGGTTTTTT ATGTTTAGGTGTGGCGACAATGATCTATTTACCTTTTGTTATTGCCGCCAACAAAGTCAATAACATGACAACTAACGGAT AA
Upstream 100 bases:
>100_bases TGCGATGAAACTACTGCAAGAGTAAGAATCTAATATTATTAAACTATTACCTGAACTAACTTTTCACACATCATAAAATG GATATGGCATACATGCTTTA
Downstream 100 bases:
>100_bases TTCCATTTACCCAGGAAGGAGATTGTGATGTTTGCAGATGAAGAACTTGTTATGGAGTTACTGGTCAACGCGGGGCAGGC ACGTTCTGACGCGATGGAAG
Product: putative phosphotransferase system IIC component
Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EIIC-Chb; PTS system N,N'-diacetylchitobiose-specific EIIC component [H]
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MGCINIQNNRYKKMGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDGFIAGLLH LNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNMAISYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLTTKYLGA QGLFVAVIVALITSEIFCRLARNPKITITMPAAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQT PLKHMGTNIFAVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWGAPYPITWTSINDAFANCGGS GMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVPFIMVPIVNCAIGYFFISMEIIPPVAYA VPWTTPGPLIAFLGTGGNWLALLVGFLCLGVATMIYLPFVIAANKVNNMTTNG
Sequences:
>Translated_453_residues MGCINIQNNRYKKMGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDGFIAGLLH LNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNMAISYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLTTKYLGA QGLFVAVIVALITSEIFCRLARNPKITITMPAAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQT PLKHMGTNIFAVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWGAPYPITWTSINDAFANCGGS GMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVPFIMVPIVNCAIGYFFISMEIIPPVAYA VPWTTPGPLIAFLGTGGNWLALLVGFLCLGVATMIYLPFVIAANKVNNMTTNG >Mature_452_residues GCINIQNNRYKKMGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDGFIAGLLHL NSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNMAISYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLTTKYLGAQ GLFVAVIVALITSEIFCRLARNPKITITMPAAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQTP LKHMGTNIFAVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWGAPYPITWTSINDAFANCGGSG MTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVPFIMVPIVNCAIGYFFISMEIIPPVAYAV PWTTPGPLIAFLGTGGNWLALLVGFLCLGVATMIYLPFVIAANKVNNMTTNG
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788032, Length=443, Percent_Identity=36.7945823927765, Blast_Score=254, Evalue=8e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003352 - InterPro: IPR004796 - InterPro: IPR004501 [H]
Pfam domain/function: PF02378 PTS_EIIC [H]
EC number: NA
Molecular weight: Translated: 49328; Mature: 49196
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS51105 PTS_EIIC_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCINIQNNRYKKMGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSL CCCEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHCCCHHEEHHHHHHHH IILINFAILSPDGFIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNMAI HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEE SYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLTTKYLGAQGLFVAVIVALITSEIFCRL EECCCHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHH ARNPKITITMPAAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQT CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PLKHMGTNIFAVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWG HHHHHCCHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCC APYPITWTSINDAFANCGGSGMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMF CCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHC GLPIVLNPIMMVPFIMVPIVNCAIGYFFISMEIIPPVAYAVPWTTPGPLIAFLGTGGNWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEEEECCCCHH ALLVGFLCLGVATMIYLPFVIAANKVNNMTTNG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GCINIQNNRYKKMGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSL CCEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHCCCHHEEHHHHHHHH IILINFAILSPDGFIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNMAI HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEE SYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLTTKYLGAQGLFVAVIVALITSEIFCRL EECCCHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHH ARNPKITITMPAAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQT CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PLKHMGTNIFAVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWG HHHHHCCHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCC APYPITWTSINDAFANCGGSGMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMF CCCCEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHC GLPIVLNPIMMVPFIMVPIVNCAIGYFFISMEIIPPVAYAVPWTTPGPLIAFLGTGGNWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEEEECCCCHH ALLVGFLCLGVATMIYLPFVIAANKVNNMTTNG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2179047; 9097039; 9278503; 2092358; 9405618; 10913117 [H]