Click here to switch to the map view.

The map label for this gene is yccE

Identifier: 218694536

GI number: 218694536

Start: 1172716

End: 1173903

Strand: Direct

Name: yccE

Synonym: EC55989_1111

Alternate gene names: 218694536

Gene position: 1172716-1173903 (Clockwise)

Preceding gene: 218694533

Following gene: 218694537

Centisome position: 22.75

GC content: 34.68

Gene sequence:

>1188_bases
ATGAGCACGAAAAAAAATCAAAAATATTCAATCACGCTTTTTGAAAACACACTGGTGTGTTTTATGCGGTTGTATAAAGA
AATCAGACGTCAAAAAGCTGAAGACTACATTCCATGCCTGGAATGCGATTCACTAGAAAAAGAATTTGAGGAAATGCAGA
ATGATAATGATTTATCATTATTTTTGAGAACATTGCGTACTAATGATACAGAAACTTATTCAGGGGTTTCAGAAGGTATT
ACATATACTATACAATATGTTCGAGATATTGATATTGTTAGAGTGTCCTTGCCGGGCAGAGGTTCAGAGTCTATCACAGA
TTTTAAAGGTTATTATTGGTATGGCTTTATGGAATATATTGAAAACATTAATGCGTGTGATGATGTTTTTTCTGAGTATT
GTTTAGATGATGAAAATATGAGTATCCAGCCAGAATGGATAAATACGCCGGGAATATCTGATTTAGATACTGGTATTGAT
TTGTCTGGTATATCTTTTATTCAGAGTGAAATTAATAAAACTTATGGATTAAAATACGCTCCAGTAGATGGCGATGGCTA
TTGTCTGTTAAGGGCCATACTGGTTTTAAAAGAACATGAGTATTCATGGGCGCTGGGCAGCCATAAGACGCAAAAGCAAG
TATACGAAGAGTTTATTAAAATTGTTGATAAACAAACGATCGAGGCTCTTGTTGATACGGCATTCAATGATCTCAGGGAA
GATGTAAAGACATTATTCGGCGTTAATCTACAATCTGACAACAAAATTCAGGGGCAGGGTGGTTTTTTATCATGGAGTTT
TTTGTCTTTTAAAAAAGAATTTATTGATAGTTGCTTGAATGACAAAAAATGCATACTGCATTTACCCGAATTTATATTTA
ATGATAACAAGGTACGCCTTGTTTTAGACACCGACCCAGAGCAGAGGGTTAATGAGGTGAAAAATTTCCTCACTGCTCTT
TCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATATGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGA
TGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACGTTTACCTCCCTCCTGAACTTTTTGCTCAGG
CTTACAAGTTAAACAATAAGGAAAGGAATGCGCAACTCGACTATTTAAATCGTTATGCAATTTACTGA

Upstream 100 bases:

>100_bases
ATTTATTAAATTTTATAGGCGCTATATATGAGTAGTAATATACATGGAATTAGTTGCACTGCAAATAATTATTTGAAACA
AGCCTGGAACAATATAAAAA

Downstream 100 bases:

>100_bases
CAAGGGCATGTGCTAAAAACCATTGTTATTAGCCTCACTTCTCTTATTATTGGTACTATTGCCTCTGTATTAGTAACGCC
GCTGATATCCTGTTTAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-D [H]

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSTKKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEMQNDNDLSLFLRTLRTNDTETYSGVSEGI
TYTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYGFMEYIENINACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGID
LSGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLRE
DVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKVRLVLDTDPEQRVNEVKNFLTAL
SDSICSLFIVNSNMASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKERNAQLDYLNRYAIY

Sequences:

>Translated_395_residues
MSTKKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEMQNDNDLSLFLRTLRTNDTETYSGVSEGI
TYTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYGFMEYIENINACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGID
LSGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLRE
DVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKVRLVLDTDPEQRVNEVKNFLTAL
SDSICSLFIVNSNMASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKERNAQLDYLNRYAIY
>Mature_394_residues
STKKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEMQNDNDLSLFLRTLRTNDTETYSGVSEGIT
YTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYGFMEYIENINACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGIDL
SGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLRED
VKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKVRLVLDTDPEQRVNEVKNFLTALS
DSICSLFIVNSNMASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKERNAQLDYLNRYAIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787236, Length=391, Percent_Identity=83.8874680306905, Blast_Score=680, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45725; Mature: 45594

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEMQNDNDLSL
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
FLRTLRTNDTETYSGVSEGITYTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYGFMEYI
HHHHHHCCCCHHHCCHHHCCEEEEEEEECCEEEEEECCCCCCCCCHHCCCHHHHHHHHHH
ENINACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGIDLSGISFIQSEINKTYGLKYA
HCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
PVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLRE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKVRL
HHHHHHCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCEEEE
VLDTDPEQRVNEVKNFLTALSDSICSLFIVNSNMASISLGNESFSTDEDLEYGYLMNTGN
EEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCC
HYDVYLPPELFAQAYKLNNKERNAQLDYLNRYAIY
EEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
STKKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEMQNDNDLSL
CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
FLRTLRTNDTETYSGVSEGITYTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYGFMEYI
HHHHHHCCCCHHHCCHHHCCEEEEEEEECCEEEEEECCCCCCCCCHHCCCHHHHHHHHHH
ENINACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGIDLSGISFIQSEINKTYGLKYA
HCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
PVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLRE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKVRL
HHHHHHCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCEEEE
VLDTDPEQRVNEVKNFLTALSDSICSLFIVNSNMASISLGNESFSTDEDLEYGYLMNTGN
EEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCC
HYDVYLPPELFAQAYKLNNKERNAQLDYLNRYAIY
EEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8302830 [H]