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The map label for this gene is torD

Identifier: 218694533

GI number: 218694533

Start: 1170466

End: 1171065

Strand: Direct

Name: torD

Synonym: EC55989_1108

Alternate gene names: 218694533

Gene position: 1170466-1171065 (Clockwise)

Preceding gene: 218694532

Following gene: 218694536

Centisome position: 22.71

GC content: 52.83

Gene sequence:

>600_bases
ATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTGGCGCAGTTGTTCTCCCGTGAACTGGACGATGA
ACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTGGCTGCGGCGG
TGAATGAGCTGGAAAACTGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCTGACTTTTGCGGC
CTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTT
GTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCA
GCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCG
CTGTGGCAATGGTTACCAGAGTTTGTTGTGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTT
ATTGCTGGTGTTAGTGGAGAGCGACCACCAAAACAGATAA

Upstream 100 bases:

>100_bases
TTGAGAAGTACAATGGAGCAGTGGAGCAGGTGACGGCGTTTAACGGCCCTGTGGAGATGGTGGCGCAGTGCGAATATGTT
CCCGCGTCGCAGGTGAAATC

Downstream 100 bases:

>100_bases
CGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGGGCAGTTGCCGGATGCGTCATCACATCC
GGCAAACACACATCACGGAT

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCG
LFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
LWQWLPEFVVRCRQYDSFGFYAALSQLLLVLVESDHQNR

Sequences:

>Translated_199_residues
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCG
LFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
LWQWLPEFVVRCRQYDSFGFYAALSQLLLVLVESDHQNR
>Mature_198_residues
TTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCGL
FLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTAL
WQWLPEFVVRCRQYDSFGFYAALSQLLLVLVESDHQNR

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily

Homologues:

Organism=Escherichia coli, GI1787232, Length=199, Percent_Identity=97.9899497487437, Blast_Score=397, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TORD_ECO24 (A7ZKA2)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462231.1
- ProteinModelPortal:   A7ZKA2
- SMR:   A7ZKA2
- STRING:   A7ZKA2
- EnsemblBacteria:   EBESCT00000021331
- GeneID:   5587048
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1116
- eggNOG:   COG3381
- GeneTree:   EBGT00050000011025
- HOGENOM:   HBG662677
- OMA:   ARCLEED
- ProtClustDB:   PRK04976
- BioCyc:   ECOL331111:ECE24377A_1116-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01150
- InterPro:   IPR023069
- InterPro:   IPR020945
- InterPro:   IPR009073
- Gene3D:   G3DSA:1.20.1280.20

Pfam domain/function: PF02613 Nitrate_red_del

EC number: NA

Molecular weight: Translated: 22503; Mature: 22372

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENC
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFN
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
EPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVVRCRQYDSFGF
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YAALSQLLLVLVESDHQNR
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENC
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFN
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
EPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVVRCRQYDSFGF
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YAALSQLLLVLVESDHQNR
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA