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The map label for this gene is ycbQ

Identifier: 218694413

GI number: 218694413

Start: 1060725

End: 1061276

Strand: Direct

Name: ycbQ

Synonym: EC55989_0987

Alternate gene names: 218694413

Gene position: 1060725-1061276 (Clockwise)

Preceding gene: 218694407

Following gene: 218694414

Centisome position: 20.58

GC content: 43.48

Gene sequence:

>552_bases
ATGATGACGATGAAAAAAAGTGTATTGACGGCGTTTATAACTGTGGTATGTGCAACGTCCAGCGTTATGGCAGCTGATGA
TAATGCTATCACGGATGGCAAAGTAACATTTAATGGTAAAGTTATTGCTCCAGCTTGTACCCTGGTAGCTGCGACGAAAG
ATTCAGTAGTCACATTGCCAAATGTCAGCGCCACCAAGTTGCAAACTAATGGAGCAGTCTCTGGCGTTAAAACTGATGTA
CCAATTGCCTTAGAAGGCTGTGATGTTACTGTAACTAAAAATGCGACGTTTACCTTTAGTGGTACGGCTGACGGCGTGCA
ACCTACAGCATTTGCCAACCAGGCTACCACCGATGCAGCGACGAATGTTGCTCTACAAATGTATCTGCCAGATGGTTCTA
CATCGGTAACTCCCGGTACCGAAACGTCGAATATTCAGTTAGCGGATTCTGCTGAGCAAACAGTGACCTTTAAAGTTGAT
TATATCGCTACGGGGAAAGCGACTTCTGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAA

Upstream 100 bases:

>100_bases
TTATTGGATTTAGTATGCTTGATTTAAATGGCGGTCAATTATTGTTATTATTAAGTCTAATGTCATTTAAAGGCATTATC
ATATTTACGAAGAGATCAGG

Downstream 100 bases:

>100_bases
TAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCTAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTAT
TTATGAAAACTTGCATAACA

Product: putative fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLPNVSATKLQTNGAVSGVKTDV
PIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVD
YIATGKATSGNVNAVTNFHINYY

Sequences:

>Translated_183_residues
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLPNVSATKLQTNGAVSGVKTDV
PIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVD
YIATGKATSGNVNAVTNFHINYY
>Mature_183_residues
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLPNVSATKLQTNGAVSGVKTDV
PIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVD
YIATGKATSGNVNAVTNFHINYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081804, Length=180, Percent_Identity=84.4444444444444, Blast_Score=296, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18820; Mature: 18820

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLP
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCEEECCEEEEEEECCCCEEEEC
NVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAA
CCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
TNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIATGKATSGNVNAVTNFHI
CEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEEE
NYY
EEC
>Mature Secondary Structure
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLP
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCEEECCEEEEEEECCCCEEEEC
NVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAA
CCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
TNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIATGKATSGNVNAVTNFHI
CEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEEE
NYY
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]