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The map label for this gene is sfmH

Identifier: 218693996

GI number: 218693996

Start: 590154

End: 591131

Strand: Direct

Name: sfmH

Synonym: EC55989_0547

Alternate gene names: 218693996

Gene position: 590154-591131 (Clockwise)

Preceding gene: 218693995

Following gene: 218693997

Centisome position: 11.45

GC content: 45.3

Gene sequence:

>978_bases
ATGGAATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTA
TGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAG
GTGTGTCAGCAATTTGTCCACCCGGCACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAA
ACTATCGATAATTATAAATATATGCAATTAAATGATTATCTATTAGGTGCGGTGAGTCTGGTTGATAGTGTGATGGATAT
TCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCACAAAACCTTCCATTCGGGGTGATGGATT
CTCGTTTAATATTTCGTTTAAAGGTTATTCGTCCCTTTATTAACATGGTGGAGATCCCCAGACAGGTGATGTTTACCGTG
TATGTGACATCAACGCCTTACGATCCGTTGGTTACACCTGTTTATACCATTAGTTTTGGTGGCCGGGTTGAAGTACCGCA
AAACTGCGAATTAAATGCCGGGCAGATTGTTGAATTTGATTTTGGTGATATCGGCGCATCGTTATTTAGTGCGGCAGGGC
CGGGTAATCGACCTGCTGGTGTCATGCCGCAAACCAAGAGCATTGCGGTCAAATGTACGAATGTTGCTGCGCAGGCTTAT
TTAACAATGCGTCTGGAAGCCAGTGCCGTTTCTGGTCAGGCGATGGTGTCGGACAATCAGGATTTAGGTTTTATTGTCGC
CGATCAGAACGATACGCCGATCACGCCTAACGATCTCAATAGCGTTATTCCTTTCCGTCTGGATGCAGCTGCGGCAGCCA
ATGTCACACTTCGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTA
CGCGTCGATTATCAATGA

Upstream 100 bases:

>100_bases
AAGCTTACAGCAAGCCGTCACTGTTATTTCGGCAGTTTGCACACATCCTGGCTCATAAAGGAAATTATCAATGAAGATAA
TCTGCAGATTATTATTGGCG

Downstream 100 bases:

>100_bases
GGTACGGAGAATGAGAAGAGCACTCTTTAGCTGTTTCTGCGGGTTACTGTGGATTTCCAGTGGATGGGCAGCTGACCCTT
TGGGAACGATTAATATCAAT

Product: putative fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MECLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQE
TIDNYKYMQLNDYLLGAVSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTV
YVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAY
LTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYL
RVDYQ

Sequences:

>Translated_325_residues
MECLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQE
TIDNYKYMQLNDYLLGAVSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTV
YVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAY
LTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYL
RVDYQ
>Mature_325_residues
MECLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQE
TIDNYKYMQLNDYLLGAVSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTV
YVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAY
LTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYL
RVDYQ

Specific function: Involved in regulation of length and mediation of adhesion of sfmA fimbriae (but not necessary for the production of fimbriae). Seems to be mannose binding adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693100, Length=325, Percent_Identity=99.0769230769231, Blast_Score=663, Evalue=0.0,
Organism=Escherichia coli, GI1787173, Length=259, Percent_Identity=25.0965250965251, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35497; Mature: 35497

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICP
CCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEECC
PGTLVNYTYRSYVTNFIVQETIDNYKYMQLNDYLLGAVSLVDSVMDIQFPPQNYIRMGTD
CCCEEEEEHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHEEECCC
PNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEECC
GRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAY
CEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECEEEEEE
LTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAW
EEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEE
PISITGQKPTEGPFSALGYLRVDYQ
EEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MECLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICP
CCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEECC
PGTLVNYTYRSYVTNFIVQETIDNYKYMQLNDYLLGAVSLVDSVMDIQFPPQNYIRMGTD
CCCEEEEEHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHEEECCC
PNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEECC
GRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAY
CEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECEEEEEE
LTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAW
EEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEE
PISITGQKPTEGPFSALGYLRVDYQ
EEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]