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The map label for this gene is ybbC

Identifier: 218693962

GI number: 218693962

Start: 555475

End: 555843

Strand: Direct

Name: ybbC

Synonym: EC55989_0513

Alternate gene names: 218693962

Gene position: 555475-555843 (Clockwise)

Preceding gene: 218693961

Following gene: 218693963

Centisome position: 10.78

GC content: 30.62

Gene sequence:

>369_bases
ATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGA
TGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACATTTAGATAAATACTCTGTTAAAAATACGGTAAAAACTGAAA
CAATGGCGATACAATTAGCTGAAATATATGTTAGGTATCGCTATGGCGAACGGATTGCAGAAGAAGAAAAACCATATTTA
ATTACGGAACTACCAGATAGTTGGGTTGTTGAGGGAGCAAAGTTACCTTATGAAGTTGCGGGTGGTGTATTTATTATAGA
AATTAATAAGAAAAATGGATGTGTTTTGAATTTCCTACATAGTAAATAA

Upstream 100 bases:

>100_bases
GTCATTACCCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTTTATTAGT
GGGGCCTATAAGGAGATTCA

Downstream 100 bases:

>100_bases
TGCTGGCGCTGATGGATGCGGATGGAAACATTGCGTGGAGCGGGGAGTATGATGAGTGGGGCAACCAGCTGAATGAAGAG
AACCCGCATCACCTGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYL
ITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK

Sequences:

>Translated_122_residues
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYL
ITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK
>Mature_122_residues
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYL
ITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786707, Length=122, Percent_Identity=100, Blast_Score=251, Evalue=9e-69,
Organism=Escherichia coli, GI87082272, Length=96, Percent_Identity=56.25, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBBC_ECOLI (P33668)

Other databases:

- EMBL:   X60999
- EMBL:   U82664
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A64781
- RefSeq:   AP_001147.1
- RefSeq:   NP_415031.1
- DIP:   DIP-11316N
- STRING:   P33668
- EnsemblBacteria:   EBESCT00000001237
- EnsemblBacteria:   EBESCT00000017782
- GeneID:   945115
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0487
- KEGG:   eco:b0498
- EchoBASE:   EB1719
- EcoGene:   EG11769
- GeneTree:   EBGT00050000010421
- HOGENOM:   HBG470343
- ProtClustDB:   CLSK891718
- BioCyc:   EcoCyc:EG11769-MONOMER
- Genevestigator:   P33668

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14153; Mature: 14153

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLA
CCHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHCCCHHHCCCCCHHHHHHHHH
EIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLH
HHHHHHHHCCHHCCCCCCEEEEECCCCCEEECCCCCHHHCCCEEEEEEECCCCEEEEEEC
SK
CC
>Mature Secondary Structure
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLA
CCHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHCCCHHHCCCCCHHHHHHHHH
EIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLH
HHHHHHHHCCHHCCCCCCEEEEECCCCCEEECCCCCHHHCCCEEEEEEECCCCEEEEEEC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766878; 9278503