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The map label for this gene is traL

Identifier: 218692895

GI number: 218692895

Start: 87535

End: 87846

Strand: Reverse

Name: traL

Synonym: p1ECUMN_0110

Alternate gene names: 218692895

Gene position: 87846-87535 (Counterclockwise)

Preceding gene: 218692896

Following gene: 218692894

Centisome position: 71.83

GC content: 46.79

Gene sequence:

>312_bases
ATGTCGGGAGACGAGAATAAACTTAAGAAATATCGTTTCCCGGAAACACTGACCAACCAGAGCCGCTGGTTTGGCCTGCC
ACTGGATGAACTGATCCCCGCAGCAATCTGTATTGGCTGGGGTATCATAACATCGAAATATCTGTTCGGTATTGGTGCAG
CGGTTCTGGTTTATTTCGGGATTAAAAAACTGAAAAAAGGGCGGGGCAGTTCCTGGTTACGTGACCTGATTTACTGGTAT
ATGCCAACAGCCCTGCTGCGCGGTATTTTTCATAATGTTCCCGATTCGTGTTTCCGGCAGTGGATTAAATAG

Upstream 100 bases:

>100_bases
TGATGACCAAAAACATCAAGTTCCTGGTCGGCTTTGCCATACTCTCTGTATTTATTGCAGTAGGTATGTCTGTTGCCGGA
TTCTGACAGGAAATAAAACG

Downstream 100 bases:

>100_bases
AACTGATACCAGGATTGTTATATGGAACACGGTGCCCGTTTAAGTACCAGTCGTGTAATGGCCATCGCCTTTATATTTAT
GTCAGTGCTTATTGTTCTCA

Product: conjugal transfer protein TraL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGIITSKYLFGIGAAVLVYFGIKKLKKGRGSSWLRDLIYWY
MPTALLRGIFHNVPDSCFRQWIK

Sequences:

>Translated_103_residues
MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGIITSKYLFGIGAAVLVYFGIKKLKKGRGSSWLRDLIYWY
MPTALLRGIFHNVPDSCFRQWIK
>Mature_102_residues
SGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGIITSKYLFGIGAAVLVYFGIKKLKKGRGSSWLRDLIYWYM
PTALLRGIFHNVPDSCFRQWIK

Specific function: Membrane protein involved in F pilin formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016382
- InterPro:   IPR009838 [H]

Pfam domain/function: PF07178 TraL [H]

EC number: NA

Molecular weight: Translated: 11916; Mature: 11785

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGIITSKYLFGIGAAVLVYFG
CCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKLKKGRGSSWLRDLIYWYMPTALLRGIFHNVPDSCFRQWIK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
SGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGIITSKYLFGIGAAVLVYFG
CCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKLKKGRGSSWLRDLIYWYMPTALLRGIFHNVPDSCFRQWIK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6090426; 7915817; 2564189; 8655498 [H]