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The map label for this gene is trbF

Identifier: 218692871

GI number: 218692871

Start: 70976

End: 71401

Strand: Reverse

Name: trbF

Synonym: p1ECUMN_0085

Alternate gene names: 218692871

Gene position: 71401-70976 (Counterclockwise)

Preceding gene: 218692872

Following gene: 218692870

Centisome position: 58.38

GC content: 37.56

Gene sequence:

>426_bases
ATGAATCATCGGAAATATCAGAGGAAACTTATAATGAAAGAAAAAAGAAATGATGCGGAACTAAAAAACAGAAAAACTAA
ACGGGATTATGATTATGAACGCAGGGTTTCTGATATATATTTTGATCTGTTTTTTGTGTTCGTTGCTGCCGGAACTTTTT
TATGGGTGATTATGCATAGTATTTTTGATGCCTGTATTGATTCGTGGAAAGCTGACCCGGAATTAAATAATTTTCGTTAT
ATGTGGAACATCCTGATGTATGTCATTCCGTATACGTTATGGGCGTTTGCAGGTGGATTTCTTATCGTATACGTCAGGAA
CCCTTTAAATGAATTAATAAACGGGGGGATCAGAATATTCCGGCTGAAACGCCGTATGCGCCGGGAGAACAAATTAAGGG
AGGGTGGCAATAATGCTTCGCATTAA

Upstream 100 bases:

>100_bases
CTGTGTCTTACCTTTTCTGTTTCTGTTGTGTTTTTTGTGGGGGCAATTGTGGGATGGATTTCGGTGTCTGAAATATATTA
CAGCCGCATGAACGGTCTGA

Downstream 100 bases:

>100_bases
ACCTCTTCTGGTTCTTTGTGCCGCTTTACTGACGGTCACACCCGCAGCGTCAGCGGATGTGAACAGCGACATGAATCAGT
TCTTTAATAAGCTGGGATTT

Product: conjugal transfer protein TrbF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNHRKYQRKLIMKEKRNDAELKNRKTKRDYDYERRVSDIYFDLFFVFVAAGTFLWVIMHSIFDACIDSWKADPELNNFRY
MWNILMYVIPYTLWAFAGGFLIVYVRNPLNELINGGIRIFRLKRRMRRENKLREGGNNASH

Sequences:

>Translated_141_residues
MNHRKYQRKLIMKEKRNDAELKNRKTKRDYDYERRVSDIYFDLFFVFVAAGTFLWVIMHSIFDACIDSWKADPELNNFRY
MWNILMYVIPYTLWAFAGGFLIVYVRNPLNELINGGIRIFRLKRRMRRENKLREGGNNASH
>Mature_141_residues
MNHRKYQRKLIMKEKRNDAELKNRKTKRDYDYERRVSDIYFDLFFVFVAAGTFLWVIMHSIFDACIDSWKADPELNNFRY
MWNILMYVIPYTLWAFAGGFLIVYVRNPLNELINGGIRIFRLKRRMRRENKLREGGNNASH

Specific function: Unknown. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016386 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17152; Mature: 17152

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHRKYQRKLIMKEKRNDAELKNRKTKRDYDYERRVSDIYFDLFFVFVAAGTFLWVIMHS
CCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFDACIDSWKADPELNNFRYMWNILMYVIPYTLWAFAGGFLIVYVRNPLNELINGGIRIF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHCCHHHH
RLKRRMRRENKLREGGNNASH
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNHRKYQRKLIMKEKRNDAELKNRKTKRDYDYERRVSDIYFDLFFVFVAAGTFLWVIMHS
CCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFDACIDSWKADPELNNFRYMWNILMYVIPYTLWAFAGGFLIVYVRNPLNELINGGIRIF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHCCHHHH
RLKRRMRRENKLREGGNNASH
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2656408; 7915817; 2536655 [H]