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The map label for this gene is traH

Identifier: 218692870

GI number: 218692870

Start: 69616

End: 70998

Strand: Reverse

Name: traH

Synonym: p1ECUMN_0084

Alternate gene names: 218692870

Gene position: 70998-69616 (Counterclockwise)

Preceding gene: 218692871

Following gene: 218692869

Centisome position: 58.05

GC content: 52.21

Gene sequence:

>1383_bases
GTGGCAATAATGCTTCGCATTAAACCTCTTCTGGTTCTTTGTGCCGCTTTACTGACGGTCACACCCGCAGCGTCAGCGGA
TGTGAACAGCGACATGAATCAGTTCTTTAATAAGCTGGGATTTGCTTCCAATACCACACAACCGGGCGTCTGGCAGGGGC
AGGCCGCCGGGTATGCCTATGGTGGCTCCCTGTATGCCCGCACCCAGGTCAAAAATATCCAGCTGATTTCCATGACGCTG
CCGGATATCAATGCCGGATGTGGCGGCATCGACGCCTATCTCGGCTCGTTCAGTTTTATTAATGGCGATCAGTTGCAGCG
TTTTGTTAAGCAGATTATGAGCAACGCTGCCGGTTACTTTTTTGACCTTGCCCTGCAGGCAACGGTGCCGGAAATCAAAA
CCGCAAAAGACTTCCTGCAGAAAATGGCAAGCGACATTAACAGTATGAACCTCAGCTCCTGTCAGGTGGCGCAGGGGATT
GTCGGAGGATTATTTCCTCAGACTCAGGTGTCACAGCAGAAGGTCTGTCAGGACATTGCCGGTGAGAGCAATATTTTTGC
TGACTGGGCCGCGTCCCGTCAGGGCTGCACGGTCGGAGGACAGTCATCGTCTGTTCGTGACAAGGCCAGTGACAAAGATA
AGGAACGGGTGCTGAAGAACATCAATATCATCTGGGACTCGCTGTCCAAAAACAGGATGCTTGATGGTAACAAAGAACTG
AAAGAATTTATTATGACGCTCACCGGTACGCTGATTTTTGGGGAAGACAGCGAGATTACCCCCCTGCCGGCGCGTACCAC
TGACCGCGATATCCTCCGGGCGATTATGGAGGGGGGAACGGCAAAAGTTTATCACTGCAACGATTCGGACAAGTGTCTGA
AGGTGGTGGCGGATGCAAATGTGACCATCGCCCGGGATAAAGCCCTGAAATCACAGATTACAAAACTGCTCACCAGTATT
CAGAATAAAGCGGTGAGTGATACTCCACTGGATGACAGGGAAAAAGGCTTCATTTCCAGCACCACCGTCCCCGTCTTTAA
ATATCTTATTGACCCGCAGATGCTCGGTGTGTCCAGCAGCGTGGTTTACCAGCTGACGGACTATATCGGCTACGACATCA
TGCTCCAGTACATTCAGGAACTGCTTCAGCAGGCCCGGGCCATGATTGCCACCGGGAACTATCCACAGACCGTGCTGGAC
AGTGTGCTGGAGAATCTGAATCAGGCACAGCAACAGATTGCGGTTTTCCAGGGGCAGGTAAAGGTCCAGCAGGATGCATT
GCTGGTTGTTGACCGTCAGATGAGCTACATGCGCCAGCAGCTTTCCGCCCGCATGCTCAGCCGTTACCAGAACAACTATC
ACTTCGGAGGGAGCACGCTGTGA

Upstream 100 bases:

>100_bases
ATCGTATACGTCAGGAACCCTTTAAATGAATTAATAAACGGGGGGATCAGAATATTCCGGCTGAAACGCCGTATGCGCCG
GGAGAACAAATTAAGGGAGG

Downstream 100 bases:

>100_bases
ATGAAGTCTATGTGATTGCCGGTGGTGAGTGGTTAAGCAATAACCTGAACGCCATTGCCGCCTTTATGGGGACCCGGACG
TGGGATTCCATCGAAAAAAT

Product: conjugal transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MAIMLRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAYGGSLYARTQVKNIQLISMTL
PDINAGCGGIDAYLGSFSFINGDQLQRFVKQIMSNAAGYFFDLALQATVPEIKTAKDFLQKMASDINSMNLSSCQVAQGI
VGGLFPQTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNINIIWDSLSKNRMLDGNKEL
KEFIMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGGTAKVYHCNDSDKCLKVVADANVTIARDKALKSQITKLLTSI
QNKAVSDTPLDDREKGFISSTTVPVFKYLIDPQMLGVSSSVVYQLTDYIGYDIMLQYIQELLQQARAMIATGNYPQTVLD
SVLENLNQAQQQIAVFQGQVKVQQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL

Sequences:

>Translated_460_residues
MAIMLRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAYGGSLYARTQVKNIQLISMTL
PDINAGCGGIDAYLGSFSFINGDQLQRFVKQIMSNAAGYFFDLALQATVPEIKTAKDFLQKMASDINSMNLSSCQVAQGI
VGGLFPQTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNINIIWDSLSKNRMLDGNKEL
KEFIMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGGTAKVYHCNDSDKCLKVVADANVTIARDKALKSQITKLLTSI
QNKAVSDTPLDDREKGFISSTTVPVFKYLIDPQMLGVSSSVVYQLTDYIGYDIMLQYIQELLQQARAMIATGNYPQTVLD
SVLENLNQAQQQIAVFQGQVKVQQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL
>Mature_459_residues
AIMLRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAYGGSLYARTQVKNIQLISMTLP
DINAGCGGIDAYLGSFSFINGDQLQRFVKQIMSNAAGYFFDLALQATVPEIKTAKDFLQKMASDINSMNLSSCQVAQGIV
GGLFPQTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNINIIWDSLSKNRMLDGNKELK
EFIMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGGTAKVYHCNDSDKCLKVVADANVTIARDKALKSQITKLLTSIQ
NKAVSDTPLDDREKGFISSTTVPVFKYLIDPQMLGVSSSVVYQLTDYIGYDIMLQYIQELLQQARAMIATGNYPQTVLDS
VLENLNQAQQQIAVFQGQVKVQQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 50549; Mature: 50418

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00214 FABP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIMLRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAY
CEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
GGSLYARTQVKNIQLISMTLPDINAGCGGIDAYLGSFSFINGDQLQRFVKQIMSNAAGYF
CCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH
FDLALQATVPEIKTAKDFLQKMASDINSMNLSSCQVAQGIVGGLFPQTQVSQQKVCQDIA
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GESNIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNINIIWDSLSKNRMLDGNKEL
CCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
KEFIMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGGTAKVYHCNDSDKCLKVVADAN
HHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCC
VTIARDKALKSQITKLLTSIQNKAVSDTPLDDREKGFISSTTVPVFKYLIDPQMLGVSSS
EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHCCCHH
VVYQLTDYIGYDIMLQYIQELLQQARAMIATGNYPQTVLDSVLENLNQAQQQIAVFQGQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KVQQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL
EEECCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AIMLRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAY
EEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
GGSLYARTQVKNIQLISMTLPDINAGCGGIDAYLGSFSFINGDQLQRFVKQIMSNAAGYF
CCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH
FDLALQATVPEIKTAKDFLQKMASDINSMNLSSCQVAQGIVGGLFPQTQVSQQKVCQDIA
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GESNIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNINIIWDSLSKNRMLDGNKEL
CCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
KEFIMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGGTAKVYHCNDSDKCLKVVADAN
HHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCC
VTIARDKALKSQITKLLTSIQNKAVSDTPLDDREKGFISSTTVPVFKYLIDPQMLGVSSS
EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHCCCHH
VVYQLTDYIGYDIMLQYIQELLQQARAMIATGNYPQTVLDSVLENLNQAQQQIAVFQGQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KVQQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL
EEECCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]