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The map label for this gene is repB

Identifier: 218692856

GI number: 218692856

Start: 52180

End: 52440

Strand: Reverse

Name: repB

Synonym: p1ECUMN_0070

Alternate gene names: 218692856

Gene position: 52440-52180 (Counterclockwise)

Preceding gene: 218692857

Following gene: 218692855

Centisome position: 42.88

GC content: 40.23

Gene sequence:

>261_bases
ATGTCGCAGATCGAAAATGCAGTAACTTCCTCACCGAAACGCATTTACAGAAAAGGTAATCCGTTAACCGGAGCCGAGAA
ACAACGCATATCTGTTTCCCGGAAAAAGGGGACACATAAAGCGATTAATGTTTTCATCCAGAGTGAACTCAAAGATGATT
TGACACAGCTTTGTAAGGATTCGGGCTTAACTCAAAAAGAAATGATAGAGCACTGGATTTTGAAAGAAAAAGCTGCGATG
ACTGATGCGAATAGAAAGTAA

Upstream 100 bases:

>100_bases
GCGCCAACACAGATCTTCGTCACAATTCTCAAGTCGCTGATTTCAAAAAACTGTAGTATCCTCTGCGAAACGATCCCTGT
TTGAGTATTGAGGAGGCGAG

Downstream 100 bases:

>100_bases
CTAAGTTACCTTCTTGAACATTTGAATTGCGGATGCTAGATTACTGATCGTTTAAGGAATTTTGTGGCTGGCCACGCCGT
AAGGTGGCAGGGAACTGGTT

Product: replication protein

Products: NA

Alternate protein names: Protein CopB [H]

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSQIENAVTSSPKRIYRKGNPLTGAEKQRISVSRKKGTHKAINVFIQSELKDDLTQLCKDSGLTQKEMIEHWILKEKAAM
TDANRK

Sequences:

>Translated_86_residues
MSQIENAVTSSPKRIYRKGNPLTGAEKQRISVSRKKGTHKAINVFIQSELKDDLTQLCKDSGLTQKEMIEHWILKEKAAM
TDANRK
>Mature_85_residues
SQIENAVTSSPKRIYRKGNPLTGAEKQRISVSRKKGTHKAINVFIQSELKDDLTQLCKDSGLTQKEMIEHWILKEKAAMT
DANRK

Specific function: This protein is involved in the determination of copy number in gene replication. It binds to the repA promoter thus inhibiting the synthesis of the mRNA for the initiator protein repA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019661 [H]

Pfam domain/function: PF10723 RepB-RCR_reg [H]

EC number: NA

Molecular weight: Translated: 9770; Mature: 9639

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIENAVTSSPKRIYRKGNPLTGAEKQRISVSRKKGTHKAINVFIQSELKDDLTQLCKD
CCHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SGLTQKEMIEHWILKEKAAMTDANRK
CCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SQIENAVTSSPKRIYRKGNPLTGAEKQRISVSRKKGTHKAINVFIQSELKDDLTQLCKD
CHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SGLTQKEMIEHWILKEKAAMTDANRK
CCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7003300; 3019092; 7029525; 2445727; 2580099; 1865183 [H]