| Definition | Escherichia coli UMN026 plasmid p1ESCUM, complete sequence. |
|---|---|
| Accession | NC_011749 |
| Length | 122,301 |
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The map label for this gene is 218692825
Identifier: 218692825
GI number: 218692825
Start: 29968
End: 30453
Strand: Reverse
Name: 218692825
Synonym: p1ECUMN_0036
Alternate gene names: NA
Gene position: 30453-29968 (Counterclockwise)
Preceding gene: 218692826
Following gene: 218692824
Centisome position: 24.9
GC content: 49.38
Gene sequence:
>486_bases ATGGCATTTATCTGGAACGACGAAAGCCTTGCGATTCTGCGGGAAAACGCGGGCATCCTCACGACAGAGCAGATAGCGCA ACTGCTTCACACTAATATTACCGCCGTGCGGAATATGGCCTATCGGCTGAAACTGAGCCTTCGGGTGACGGCGTATAATC ACCGACGCATAGCGCAGGTTCAGGCGCTTTATGCCTCTGAGACGTTGAGTCTCAAAGAGATCGCGGCGAAAACGGGGCTG ACGGCCAGTACCGTGCAATATATCGTGTACGTGAAATCAAAAAATAAGCCCTACGCCACCACGGAATATGTCTCTTTTGA AACGGAGAACGCCGTTCATTACCGCGTGCAAAAAGAATTTGTCGATACGGAACGTTCCCTGCTGGACAACATCTCTGATA ACACGCGATTTCGTGAACTGTATCTGACGGACGGCACTTTTTATTGCGCCCGCAATATTAAGTATGAGGTTTTTATCTCG GAGTAA
Upstream 100 bases:
>100_bases CGTTCTGGAGCTACACCAGGGTATGCGTAAGCCGTCTGAGTTAGAGGCCACGTTTGCGCGCCTGGCGGCGCGATGAACGA CGCGTACGGAGAGATACCCA
Downstream 100 bases:
>100_bases CCGGAACACGCTGACCTGCCGGTTATCTTCTGGAATCTCCCGTTTTGCGAAACCGTTCCCGGAAAAATGTCATATTTCTG TCACACTCTATGAGGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAFIWNDESLAILRENAGILTTEQIAQLLHTNITAVRNMAYRLKLSLRVTAYNHRRIAQVQALYASETLSLKEIAAKTGL TASTVQYIVYVKSKNKPYATTEYVSFETENAVHYRVQKEFVDTERSLLDNISDNTRFRELYLTDGTFYCARNIKYEVFIS E
Sequences:
>Translated_161_residues MAFIWNDESLAILRENAGILTTEQIAQLLHTNITAVRNMAYRLKLSLRVTAYNHRRIAQVQALYASETLSLKEIAAKTGL TASTVQYIVYVKSKNKPYATTEYVSFETENAVHYRVQKEFVDTERSLLDNISDNTRFRELYLTDGTFYCARNIKYEVFIS E >Mature_160_residues AFIWNDESLAILRENAGILTTEQIAQLLHTNITAVRNMAYRLKLSLRVTAYNHRRIAQVQALYASETLSLKEIAAKTGLT ASTVQYIVYVKSKNKPYATTEYVSFETENAVHYRVQKEFVDTERSLLDNISDNTRFRELYLTDGTFYCARNIKYEVFISE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18606; Mature: 18475
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIWNDESLAILRENAGILTTEQIAQLLHTNITAVRNMAYRLKLSLRVTAYNHRRIAQV CEEEECCCCEEEEECCCCEEEHHHHHHHHHCCHHHHHCEEEEEEEEEEEEEECCHHHHHH QALYASETLSLKEIAAKTGLTASTVQYIVYVKSKNKPYATTEYVSFETENAVHYRVQKEF HHHHHHCCCHHHHHHHHCCCCHHHEEEEEEEECCCCCCEEEEEEEEECCCEEEEEEHHHH VDTERSLLDNISDNTRFRELYLTDGTFYCARNIKYEVFISE HHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCEEEEEEEC >Mature Secondary Structure AFIWNDESLAILRENAGILTTEQIAQLLHTNITAVRNMAYRLKLSLRVTAYNHRRIAQV EEEECCCCEEEEECCCCEEEHHHHHHHHHCCHHHHHCEEEEEEEEEEEEEECCHHHHHH QALYASETLSLKEIAAKTGLTASTVQYIVYVKSKNKPYATTEYVSFETENAVHYRVQKEF HHHHHHCCCHHHHHHHHCCCCHHHEEEEEEEECCCCCCEEEEEEEEECCCEEEEEEHHHH VDTERSLLDNISDNTRFRELYLTDGTFYCARNIKYEVFISE HHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA