| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yjjI [H]
Identifier: 218692768
GI number: 218692768
Start: 5182764
End: 5184314
Strand: Reverse
Name: yjjI [H]
Synonym: ECED1_5251
Alternate gene names: 218692768
Gene position: 5184314-5182764 (Counterclockwise)
Preceding gene: 218692774
Following gene: 218692767
Centisome position: 99.52
GC content: 52.42
Gene sequence:
>1551_bases ATGCCCACTTCTCATGAAAATGCACTGCAACAACGTTGCCAGCAAATTGTCACCAGCCCGGTACTTAGCCCGGAGCAGAA GCGCCATTTTCTGGCACTGGAAGCAGAAAATAATCTGCCTTACCCACAGCTGCCTGCCGAAGCCCGCCGCGCGCTGGATG AGGGGGTAATCTGCGATATGTTTGAAGGTCATGCGCCGTACAAACCGCGCTATGTCTTACCCGATTACGCCCGTTTTTTG GCCAACGGTTCCGAATGGCTGGAGCTGGAAGGCGCAAAAGATCTTGATGACGCACTCTCTCTGCTGACCATTCTTTACCA CCACGTTCCTTCGGTCACATCGATGCCGGTCTACCTGGGGCAACTGGATGCGTTGTTGCAACCGTATGTTAGAATTCTAA CACAAGACGAGATCGATATTCGAATAAAACGTTTCTGGCGTTACCTCGACAGAACCCTGTCAGACGCCTTTATGCATGCC AATATCGGCCCGTCTGATTCGCCCATTACCCGTGCGATATTACGTGCAGACGCAGAGCTGAAGCAGGTTTCACCGAACCT GACCTTTATCTACGATCCTGATATCACCCCTGATGACCTGCTGCTGGAAGTGGCGAAAAACATCTGTGAATGTAGCAAAC CGCACATCGCCAACGGTCCGGTGCATGATAAAATTTTCACAAAAGGGGGCTACGGGATTGTGAGCTGTTACAACTCACTG CCGCTGGCGGGTGGTGGCAGCACGCTGGTACGCCTAAACCTGAAAGCCATTGCCGAGCGCAGTGAATCGCTGGAGGACTT CTTTACGCGCACTCTACCGCACTACTGCCAACAGCAGATCGCCATCATCGATGCGCGGTGTGAATTCCTCTATCAACAAT CACACTTCTTTGAGAATAGCTTCCTGGTGAAAGAAGGGCTGATTAACCCTGAACGTTTTGTGCCGATGTTTGGCATGTAT GGGCTGGCGGAAGCGGTTAACTTGCTGTGTGAAAAAGAAGGGATTGCCGCACGCTACGGTAAAGAGGCCGCCGCAAATGA AGTGGGTTATCGCATTAGCGCGCAACTGGCGGAGTTTGTCGCCAATACCCCCGTGAAATATGGCTGGCAAAAACGCGCCA TGTTACACGCACAGTCGGGGATAAGTTCCGATATCGGCACCACGCCGGGCGCGCGTTTACCATATGGCGATGAGCCAGAT CCGATTACCCATCTGCAAACTGTCGCCCCGCATCATGCTTATTATTATTCCGGCATCAGCGACATTCTGACGCTCGACGA AACCATCAAACGTAATCCGCAGGCGCTGGTACAGCTTTGCCTCGGTGCCTTTAAAGCCGGAATGCGTGAATTTACCGCCA ATGTCAGCGGTAACGATCTGGTTCGCGTTACCGGTTATATGGTGCGTTTGTCGGATTTAGAAAAATATCGCGCCGAAGGT TCACGCACCAACACTACCTGGCTGGGAGAAGAAGCCGCACGCAACACTCGTATTCTGGAACGCCAGCCGCGCGTGATAAG CCATGAACAGCAGATGCGCTTTAGTCAGTAA
Upstream 100 bases:
>100_bases CAAATGAATGCGTCAGTGGTGGCAAACGTATCAGGATCAAAGTGAACATCACGAAACTTCTTACAATGGCGCATCACCTT CGGCATAAAAGGAAAAGAAG
Downstream 100 bases:
>100_bases GATTATCCCCTTCTCCTGCGTTGACGGGCCAGGCAGTCGTCTGGCTCTGTTTTTGCAGGGCTGCAATCTGCGCTGCAAAA ACTGTCACAATCCGTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFL ANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLSDAFMHA NIGPSDSPITRAILRADAELKQVSPNLTFIYDPDITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL PLAGGGSTLVRLNLKAIAERSESLEDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMY GLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPD PITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
Sequences:
>Translated_516_residues MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFL ANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLSDAFMHA NIGPSDSPITRAILRADAELKQVSPNLTFIYDPDITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL PLAGGGSTLVRLNLKAIAERSESLEDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMY GLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPD PITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ >Mature_515_residues PTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLA NGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLSDAFMHAN IGPSDSPITRAILRADAELKQVSPNLTFIYDPDITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLP LAGGGSTLVRLNLKAIAERSESLEDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYG LAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDP ITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGS RTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0521 [H]
Homologues:
Organism=Escherichia coli, GI1790840, Length=516, Percent_Identity=99.2248062015504, Blast_Score=1069, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016905 [H]
Pfam domain/function: PF11230 DUF3029 [H]
EC number: NA
Molecular weight: Translated: 58025; Mature: 57893
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDM CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEH FEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLG HCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH QLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLSDAFMHANIGPSDSPITRAILRADAEL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHH KQVSPNLTFIYDPDITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHCCC PLAGGGSTLVRLNLKAIAERSESLEDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENS CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCHHHHHHHHHHH ANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGIS HCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCHH DILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCC SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ CCCCCEECCHHHHHCCHHHHCCCCHHCCHHHHCCCC >Mature Secondary Structure PTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDM CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEH FEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLG HCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH QLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLSDAFMHANIGPSDSPITRAILRADAEL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHH KQVSPNLTFIYDPDITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHCCC PLAGGGSTLVRLNLKAIAERSESLEDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENS CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCHHHHHHHHHHH ANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGIS HCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCHH DILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCC SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ CCCCCEECCHHHHHCCHHHHCCCCHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 3019678 [H]