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The map label for this gene is rsmC [H]

Identifier: 218692758

GI number: 218692758

Start: 5174121

End: 5175152

Strand: Reverse

Name: rsmC [H]

Synonym: ECED1_5241

Alternate gene names: 218692758

Gene position: 5175152-5174121 (Counterclockwise)

Preceding gene: 218692767

Following gene: 218692755

Centisome position: 99.34

GC content: 55.81

Gene sequence:

>1032_bases
ATGTCTGCATTTACCCCGGCAAGTGAAGTCTTGCTGCGTCACAGTGATGATTTCGAACAAAGCCGTATTCTGTTTGCCGG
AGACTTACAGGATGACCTGCCCGCGCGTTTAGATACCGCGGCCAGCCGTGCTCATACCCAGCAATTCCACCACTGGCAGG
TGTTAAGCCGCCAGATGGGGGATAACGCCCGTTTTAGCCTGGTCGCCACGGCAGATGACGTCGCAGATTGCGATACGCTG
ATCTACTACTGGCCGAAGAACAAACCGGAAGCCCAGTTCCAGTTGATGAATTTACTTTCTCTGCTTCCGGTGGGCACGGA
TATTTTTGTCGTTGGCGAGAACCGCAGCGGCGTGCGCAGCGCCGAGCAGATGCTGGCCGATTATGCACCGTTGAATAAGG
TAGACAGCGCCCGTCGCTGCGGCCTCTATTTTGGTCGTCTGGAAAAGCAGCCGGTATTTGATGCCAATAAATTCTGGGGC
GAATACAGCGTCGATGGCTTGACGGTCAAAACGCTGCCGGGCGTGTTTAGCCGCGACGGTCTGGATGTCGGCAGTCAGTT
GCTGCTCTCGACGCTAACTCCACACACGAAGGGTAAAGTGCTGGATGTCGGCTGCGGCGCAGGCGTTCTTTCCGTTGCTT
TTGCGCGCCATTCACCGAAGATCCGCCTCACTCTGTGTGATGTTTCTGCACCAGCGGTAGAAGCCAGTCGCGCAACACTT
GCGACCAACGGTGTTGAAGGTGAAGTCTTTGCCAGCAACGTCTTTTCCGAGGTGAAAGGTCGCTTTGATATGATAATCTC
CAACCCGCCGTTCCACGATGGGATGCAAACCAGCCTGGATGCGGCGCAAACGCTAATTCGCGGCGCGGTGCGTCATCTGA
ACAGCGGCGGCGAGTTGCGAATTGTAGCGAACGCCTTCCTGCCTTACCCGGACGTGCTGGATGAGACATTTGGTTTCCAC
GAAGTGATTGCGCAAACCGGGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTGA

Upstream 100 bases:

>100_bases
CGAATCGCTCCTGTTGTCAGGGGCGCAAATATAGCAAATTCGTCGATACCGCGCCAACATATGGCTATAATCGCCGCCAG
TATCAATTGAGGAGCATTCC

Downstream 100 bases:

>100_bases
GTATCTGATATATGTCGCCGCATACCGTGTCGGATGCGGCGTACACGCCTTATCTGACCGACAAACGAATTATCCACAAT
CCGCTGATGGATATTTTTCC

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTL
IYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDANKFWG
EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL
ATNGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFH
EVIAQTGRFKVYRAIMTRQAKKG

Sequences:

>Translated_343_residues
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTL
IYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDANKFWG
EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL
ATNGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFH
EVIAQTGRFKVYRAIMTRQAKKG
>Mature_342_residues
SAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLI
YYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDANKFWGE
YSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLA
TNGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHE
VIAQTGRFKVYRAIMTRQAKKG

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=343, Percent_Identity=99.4169096209913, Blast_Score=704, Evalue=0.0,
Organism=Escherichia coli, GI87082206, Length=173, Percent_Identity=34.1040462427746, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37640; Mature: 37509

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMG
CCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRS
CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDANKFWGEYSVDGLTVKTLPGVFSRDG
HHHHHHHHCCCCHHCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL
CCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCEE
ATNGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
ECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
IVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG
EEEECCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMG
CCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRS
CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDANKFWGEYSVDGLTVKTLPGVFSRDG
HHHHHHHHCCCCHHCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL
CCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCEE
ATNGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
ECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
IVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG
EEEECCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA