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The map label for this gene is fimI [H]

Identifier: 218692720

GI number: 218692720

Start: 5130004

End: 5130543

Strand: Direct

Name: fimI [H]

Synonym: ECED1_5200

Alternate gene names: 218692720

Gene position: 5130004-5130543 (Clockwise)

Preceding gene: 218692719

Following gene: 218692721

Centisome position: 98.47

GC content: 50.19

Gene sequence:

>540_bases
ATGAAAAGGAAGAGATTATTTCTGTTAGCGTCGTTGCTGCCAATGTTTGCTCTGGCCGGAAATAAATGGAATACCACGCT
GCCCGGCGGAAATATGCAATTTCAGGGCGTCATTATTGCGGAAGCTTGCCGGATTGAAGCCGGTGATAAACAAATGACGG
TCAATATGGGGCAAATCAGCAGTAACCGGTTTCATGCGGTAGGGGAAGATAGCGCACCGGTGCCTTTTGTTATTCATTTA
CGGGAATGTAGCACGGTGGTGAGTGAACGTGTGGGTGTGGCGTTTCACGGTGTCGCGGATGGTAAAAATCCGGATGTGCT
TTCCGTGGGAGAGGGGCCAGGGATAGCCACCAATATTGGTGTAGCGTTGTTTGATGATGAAGGAAACCTCGTACCGATTA
ACCGTCCTCCAGCAAACTGGAAACGGCTTTACTCAGGCTCTACGTCGCTACATTTCATCGCCAAATATCGTGCTACCGGG
CGTCGGGTTACTGGCGGTATCGCCAATGCCCAGGCCTGGTTCTCTTTAACCTATCAGTAA

Upstream 100 bases:

>100_bases
AATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACC
CTTGTGCGATAAAAATAACG

Downstream 100 bases:

>100_bases
TTGTTCAGCAGATAATGTGATAACAGGAACAGGACAGTGAGTAATAAAAACGTCAATGTAAGGAAATCGCAGGAAATAAC
ATTCTGCTTGCTGGCAGGTA

Product: type 1 pilus biosynthesis fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAEACRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHL
RECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
RRVTGGIANAQAWFSLTYQ

Sequences:

>Translated_179_residues
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAEACRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHL
RECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
RRVTGGIANAQAWFSLTYQ
>Mature_179_residues
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAEACRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHL
RECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
RRVTGGIANAQAWFSLTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87082421, Length=179, Percent_Identity=99.4413407821229, Blast_Score=370, Evalue=1e-104,
Organism=Escherichia coli, GI87081753, Length=164, Percent_Identity=32.3170731707317, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1790773, Length=185, Percent_Identity=30.8108108108108, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI87081805, Length=174, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1790769, Length=156, Percent_Identity=33.974358974359, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1787781, Length=151, Percent_Identity=29.1390728476821, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081804, Length=153, Percent_Identity=25.4901960784314, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789531, Length=200, Percent_Identity=28.5, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19343; Mature: 19343

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAEACRIEAGDKQMTVNMGQIS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCC
SNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG
CCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCEEEECE
VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
EEEECCCCCEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAEACRIEAGDKQMTVNMGQIS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCC
SNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG
CCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCEEEECE
VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ
EEEECCCCCEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 6147250 [H]