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The map label for this gene is yfcC [C]

Identifier: 218692636

GI number: 218692636

Start: 5040600

End: 5042048

Strand: Reverse

Name: yfcC [C]

Synonym: ECED1_5102

Alternate gene names: 218692636

Gene position: 5042048-5040600 (Counterclockwise)

Preceding gene: 218692637

Following gene: 218692635

Centisome position: 96.78

GC content: 51.35

Gene sequence:

>1449_bases
ATGCGTCGACGAGTGGCGTATGCCCGTGATTATGGAGATCACATTATGGGTAAATTCAAATTTCCCACCGCTTATACCAT
CTTGTTCGTGCTGATTGCGTTAGTTGCGGCAATGACCTGGATTGTACCTGCGGGAAAATATCAGATGGTGACAAATGCCG
CACTGGGAAAGGAAGTTCCTGTTGCAGGCACTTACGCACCTGTTGAGGCGCAACCACAGGGTATTACGGCTGTCCTGTTA
GCGCCCATCGACGGCTTGTACAACCATCAAACCTACACTGCGGGAGCGATTGATGTCGCGCTGTTTGTCCTGATCATCGG
TGGATTTTTGGGAGTAGTAAATAAAACCGGAGCAATAGATGCCGGTATCGAACGAGTGACAACTCGCCTTAATGGTCGGG
AAGAGTGGATGATTCCGATCCTGATGGCGCTCTTCGCTGCTGGCGGTACTATTTATGGGATGGCTGAAGAATCACTCCCC
TTCTACACGTTGCTGGTGCCCGTCATGATGGCTGCCCGCTTTGATCCTCTGGTCGCTGCCGCCACAGTGTTATTGGGAGC
GGGCATTGGCACGCTGGGCTCAACCATTAACCCATTTGCTACCGTCATTGCTGCCAACGCCGCAGGGATCCCCTTTACTC
AGGGCATTTTGCTGCGTGTTATTTTGCTGTTAGTAGGCTACGTGATTTGTGTTTACTGGGTTATGCGTTATGCCCGCAAA
GTTCGCAACAGTCCGGAAAGCTCTATCGTGGCGGATAAGATGGCTGAAAACCAGGCGCATTTTCTGGGAAATCGTTCAGA
AACGATGCTGGAATTTACCCCCACGCGCAAAGCGATCCTGATACTTTTTGCTGCATCCTTTGCCTTTATGATTTACGGCG
TAGCGGTACTGGGTTGGTGGATGGCGGAAATCTCTGCTGTCTTTCTGGCAGCTGCGGTCATCGTGGGTGTCATTGCCCGC
ATGGGCGAAGAAACCTTCACCAGTACCTTTATTGACGGCGCGCGGGATCTCCTTGGTGTGGCACTGATTATCGGCATCGC
CCGCGGTATTGTGGTCGTGATGGATAACGGCATGATTACGCACACAATTCTGCACAGTGCTGAGAATCTGGTTTCAGGGC
TTTCCACCACTGTTTTCATCAACGTGACCTATTGGCTGGAAGTATTGCTCTCTTTTCTGGTTCCCTCATCTTCCGGCCTT
GCAGTGTTAACGATGCCAATATTGGCTCCACTCGCTGATTTTGCTCATGTACAACGCGATCTGGTGGTGACCGCTTATCA
GTCTGCTTCCGGGGTGGTTAATTTGATTACGCCAACCTCTGCGGTAGTGATGGGCGGTCTGGCGATTGCCCGTGTACCCT
GGGTCCGTTATCTGAGATGGGTAGCACCGCTACTGCTGATTCTCACGATGTTGAATATGATTGTGCTGAGTATCGCCGCG
ATGATTTAA

Upstream 100 bases:

>100_bases
TTGAATCTGCCCACTCCATTGTTTTCGATGAAGCAGAAAACCGGATGCACACCATTAAAGCGGTGATGGTAGCAACTCTC
GGCGACTAACCCTGACGGGC

Downstream 100 bases:

>100_bases
CGCGACAGGCCGCTTATCAAAGCGGCCTTCAAATCTGGTGTAGTGATAAATGAACCACTCTCACATTATAAAATGTGAAA
AATATCATCAGGTAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MRRRVAYARDYGDHIMGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVPVAGTYAPVEAQPQGITAVLL
APIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLP
FYTLLVPVMMAARFDPLVAAATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARK
VRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWWMAEISAVFLAAAVIVGVIAR
MGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGL
AVLTMPILAPLADFAHVQRDLVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAA
MI

Sequences:

>Translated_482_residues
MRRRVAYARDYGDHIMGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVPVAGTYAPVEAQPQGITAVLL
APIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLP
FYTLLVPVMMAARFDPLVAAATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARK
VRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWWMAEISAVFLAAAVIVGVIAR
MGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGL
AVLTMPILAPLADFAHVQRDLVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAA
MI
>Mature_482_residues
MRRRVAYARDYGDHIMGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVPVAGTYAPVEAQPQGITAVLL
APIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLP
FYTLLVPVMMAARFDPLVAAATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARK
VRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWWMAEISAVFLAAAVIVGVIAR
MGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGL
AVLTMPILAPLADFAHVQRDLVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAA
MI

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=495, Percent_Identity=29.4949494949495, Blast_Score=214, Evalue=8e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51707; Mature: 51707

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRVAYARDYGDHIMGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVP
CCCCHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
VAGTYAPVEAQPQGITAVLLAPIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAID
CCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
AGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
ATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARK
HHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWW
HCCCCCHHHHHHHHHHCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
MAEISAVFLAAAVIVGVIARMGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMIT
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHH
HTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGLAVLTMPILAPLADFAHVQRD
HHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAA
HHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MI
HC
>Mature Secondary Structure
MRRRVAYARDYGDHIMGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVP
CCCCHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
VAGTYAPVEAQPQGITAVLLAPIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAID
CCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
AGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
ATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARK
HHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWW
HCCCCCHHHHHHHHHHCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
MAEISAVFLAAAVIVGVIARMGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMIT
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHH
HTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGLAVLTMPILAPLADFAHVQRD
HHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAA
HHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MI
HC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]