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The map label for this gene is yidK [H]

Identifier: 218691971

GI number: 218691971

Start: 4299282

End: 4300997

Strand: Reverse

Name: yidK [H]

Synonym: ECED1_4374

Alternate gene names: 218691971

Gene position: 4300997-4299282 (Counterclockwise)

Preceding gene: 218691973

Following gene: 218691970

Centisome position: 82.56

GC content: 53.38

Gene sequence:

>1716_bases
ATGAATTCGTTACAAATCTTGAGTTTTGTCGGTTTTACGCTGCTGGTAGCGGTCATCACCTGGTGGAAGGTCCGTAAAAC
AGATACCGGATCGCAACAAGGCTATTTTCTTGCCGGACGTTCACTAAAAGCGCCGGTTATTGCCGCTTCGTTAATGCTAA
CCAACCTTTCCACGGAACAACTGGTCGGCCTTTCCGGGCAGGCCTACAAAAGCGGCATGTCGGTGATGGGCTGGGAAGTC
ACCTCTGCAGTGACGCTGATCTTCCTCGCGCTAATCTTTTTACCGCGCTATCTGAAGCGCGGCATTGCCACCATCCCCGA
TTTTCTGGAGGAACGTTATGATAAAACGACGCGTATTATCATCGACTTCTGCTTCCTCATTGCCACCGGCGTCTGCTTTC
TGCCGATTGTTCTCTACTCCGGCGCGTTGGCGCTCAACAGCCTGTTTCATGTGGGTGAGTCGCTACAACTTTCCGATGGT
GCGGCTATCTGGTTACTGGTGATTTTGCTTGGTTTGGCGGGAATTTTGTATGCGGTGATCGGCGGACTGCGCGCAATGGC
AGTGGCGGACTCCATTAACGGTATTGGGCTGGTTATTGGCGGGTTGATGGTGCCGGTATTTGGCCTGATCGCGATGGGCA
AGGGCAGCTTTATGCAGGGCATTGAGCAACTCACCACCGTTCACGCCGAGAAATTAAACTCAGTCGGCGGCCCGACCGAT
CCCTTGCCGATTGGCGCGGCATTTACCGGTTTGATTCTGGTGAACACCTTTTACTGGTGTACAAATCAGGGCATCGTGCA
ACGCACGCTGGCGTCAAAAAGCCTGGCGGAAGGGCAAAAGGGGGCGCTGTTAACGGCGGTGCTGAAAATGCTCGACCCGC
TGGTACTGGTGCTGCCAGGGTTGATTGCGTTTCATCTGTATCAGGATTTACCGAAAGCCGACATGGCCTACCCGACGCTG
GTCAATAACGTTCTGCCGGTGCCACTGGTGGGCTTCTTCGGTGCGGTGTTATTTGGTGCGGTGATCAGTACCTTCAACGG
CTTTCTGAATAGCGCCAGTACGTTATTCAGTATGGGTATTTACCGGCGCATCATTAACCAGAATGCCGAGCCGCAACAGC
TGGTCACCGTCGGGCGCAAATTTGGTTTCTTTATCGCCGTCGTTTCGGTGATGGTCGCGCCGTGGATCGCCAACGCGCCG
CAGGGGCTGTATAGCTGGATGAAACAGCTCAACGGTATTTACAACGTGCCGCTGGTTACCATCATCATTATGGGCTTTTT
CTTCCCGCGCATTCCGGCGCTGGCGGCAAAAGTGGCGATGGGGATTGGCATAATCAGCTACATCACCATCAACTATCTGG
TGAAGTTCGACTTCCATTTCCTCTATGTGCTGGCCTGTACGTTCTGCATCAACGTGGTCGTGATGCTGATGATCGGTTTT
ATCAAACCGCGCGCCACGCCGCTCACCTTCAAAGATGCGTTTGCGGTGGACATGAAACCGTGGAAAAACGTCAAGATTGC
GTCAATTGGTATCCTGTTCGCGATGATTGGCGTCTATGCCGGGCTGGCTGAATTCGGTGGCTACGGTACGCGCTGGTTAG
CGATGATCAGTTATTTCATCGCCGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCC
GTCACCTTTACTCCCGATGCGAAGGATAGCCTATGA

Upstream 100 bases:

>100_bases
ACGACGTTTGTATTTTAAGAATCTGACTGCCTGACCCGACGCATTTTACCTCTCCCTATATTCATGCGTCCGGGACATAA
ACATAAATAAGGGCTATGAG

Downstream 100 bases:

>100_bases
AACGCCCCAATTTTCTGTTCATCATGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAACCGCTGAAT
ACGCAAAATATTGATAGTCT

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQLSDG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAVVSVMVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLMIGF
IKPRATPLTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL

Sequences:

>Translated_571_residues
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQLSDG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAVVSVMVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLMIGF
IKPRATPLTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL
>Mature_571_residues
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQLSDG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAVVSVMVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLMIGF
IKPRATPLTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI110835708, Length=461, Percent_Identity=29.0672451193059, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI17941285, Length=458, Percent_Identity=29.2576419213974, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI4507031, Length=468, Percent_Identity=27.5641025641026, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI14140236, Length=489, Percent_Identity=26.7893660531697, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI4507033, Length=473, Percent_Identity=30.4439746300211, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI206597483, Length=506, Percent_Identity=28.4584980237154, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI109659836, Length=453, Percent_Identity=29.1390728476821, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI109659839, Length=469, Percent_Identity=27.9317697228145, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI206597487, Length=531, Percent_Identity=27.8719397363465, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI256985183, Length=435, Percent_Identity=25.2873563218391, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI157671931, Length=451, Percent_Identity=22.8381374722838, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4507035, Length=440, Percent_Identity=22.7272727272727, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI167466278, Length=340, Percent_Identity=24.4117647058824, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI310128183, Length=408, Percent_Identity=23.7745098039216, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1790113, Length=571, Percent_Identity=98.4238178633975, Blast_Score=1132, Evalue=0.0,
Organism=Escherichia coli, GI87082237, Length=502, Percent_Identity=23.3067729083665, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533094, Length=433, Percent_Identity=20.3233256351039, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221459584, Length=335, Percent_Identity=28.3582089552239, Blast_Score=84, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24645928, Length=519, Percent_Identity=23.6994219653179, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920916, Length=359, Percent_Identity=23.6768802228412, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221459586, Length=415, Percent_Identity=23.1325301204819, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161076631, Length=347, Percent_Identity=23.342939481268, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573698, Length=342, Percent_Identity=24.2690058479532, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651739, Length=439, Percent_Identity=21.4123006833713, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221459588, Length=413, Percent_Identity=21.7917675544794, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641117, Length=322, Percent_Identity=21.1180124223602, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 62048; Mature: 62048

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]