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The map label for this gene is yidJ [H]

Identifier: 218691970

GI number: 218691970

Start: 4297792

End: 4299285

Strand: Reverse

Name: yidJ [H]

Synonym: ECED1_4373

Alternate gene names: 218691970

Gene position: 4299285-4297792 (Counterclockwise)

Preceding gene: 218691971

Following gene: 218691969

Centisome position: 82.53

GC content: 51.41

Gene sequence:

>1494_bases
ATGAAACGCCCCAATTTTCTGTTCATCATGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAACCGCT
GAATACGCAAAATATTGATAGTCTGGCGGCAGAAGGTATTCGCTTTAATTCTGCCTACACCTGTTCACCGGTTTGTACAC
CTGCACGCGCCGGACTATTCACCGGTATCTACGCTAACCAGTCCGGCCCGTGGACCAACAACGTCGCGCCGGGCAAAAAC
ATTTCCACCATGGGGCGCTACTTTAAGGATGCGGGCTATCACACCTGCTACATCGGCAAATGGCATCTCGATGGACATGA
CTATTTCGGCACTGGCGAGTGTCCGCCGGAGTGGGACGCTGATTACTGGTTCGATGGCGCGAACTATTTTAGTGAACTGA
CGGAGAAAGAGATTAGCCTGTGGCGCAATGGCCTAAACAGCGTTGAGGATTTACAGGCGAACCATATTGACGAAACCTTC
ACCTGGGCGCACCGCATCAGCAATCGGGCGGTGGATTTTCTGCAACAGCCCGCGCGCGCCGACGAACCTTTCCTGATGGT
GATTTCGTATGATGAGCCGCATCACCCGTTCACCTGTCCGGTGGAGTATTTAGAGAAATACACTGATTTTTACTACGAAC
TGGGTGAGAAAGCAGAGGATGACCTGGCGAACAAACCGGAACATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTC
GGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGCAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAA
CGCCTTAACGCCAGAGCAACGTGAAAATACGTGGGTTATTTATACCTCCGATCACGGCGAAATGATGGGCGCACATAAGC
TGATCAGTAAAGGAGCGGCGATGTATGACGACATCACCCGCATTCCGCTGATCATCCGTTCGCCGCAAGGGGAGCGGCGA
CAGGTCGATACGCCAGTCAGTCATATTGACTTACTGCCGACAATGATGGCGCTGGCAGATATTGAAAAACCAGAGATTCT
GCCGGGGGAAAATATCCTTGCCGTGAAAGAGCCACGTGGCGTGTTGGTGGAATTTAATCGCTACGAGATTGAGCATGACA
GCTTTGGCGGTTTTATTCCGGTGCGTTGCTGGGTAACGGATGACTTTAAACTGGTGCTCAACCTCTTCACCAGTGATGAA
CTTTACGATCGCCGTAATGACCCAAATGAAATGCATAACCTGATCGATGATATCCATTTTGCCGACGTTCGCAGCAAAAT
GCATGACGCCTTATTGGATTACATGGACAAAATTCGCGATCCGTTCCGCAGTTATCAATGGAACCTGCGTCCGTGGCGCA
AAGATGCACAACCGCGCTGGATGGGGGCGTTTCGTCCACGCCCACAGGATGGTTATTCTCCAGTGGTACGCGACTATGAC
ACCGGTTTACCGACACAAGGGGTGAAGGTGGAAGAGAAAAAACAGAAGTTCTGA

Upstream 100 bases:

>100_bases
ATTTCATCGCCGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCCGTCACCTTTACT
CCCGATGCGAAGGATAGCCT

Downstream 100 bases:

>100_bases
TGCATTATTGCTGTTCCTGGCCTAATTTTTCGGCGAGGAACAGTTTACAAGGAGCAACAATGAAAATTTCCCGCCTCGGA
GAAGCGCCCGATTACCGCTT

Product: putative sulfatase/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKN
ISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYFSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARADEPFLMVISYDEPHHPFTCPVEYLEKYTDFYYELGEKAEDDLANKPEHHRLWAQAMPSPV
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERR
QVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVLVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDE
LYDRRNDPNEMHNLIDDIHFADVRSKMHDALLDYMDKIRDPFRSYQWNLRPWRKDAQPRWMGAFRPRPQDGYSPVVRDYD
TGLPTQGVKVEEKKQKF

Sequences:

>Translated_497_residues
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKN
ISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYFSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARADEPFLMVISYDEPHHPFTCPVEYLEKYTDFYYELGEKAEDDLANKPEHHRLWAQAMPSPV
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERR
QVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVLVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDE
LYDRRNDPNEMHNLIDDIHFADVRSKMHDALLDYMDKIRDPFRSYQWNLRPWRKDAQPRWMGAFRPRPQDGYSPVVRDYD
TGLPTQGVKVEEKKQKF
>Mature_497_residues
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKN
ISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYFSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARADEPFLMVISYDEPHHPFTCPVEYLEKYTDFYYELGEKAEDDLANKPEHHRLWAQAMPSPV
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERR
QVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVLVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDE
LYDRRNDPNEMHNLIDDIHFADVRSKMHDALLDYMDKIRDPFRSYQWNLRPWRKDAQPRWMGAFRPRPQDGYSPVVRDYD
TGLPTQGVKVEEKKQKF

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI4557659, Length=421, Percent_Identity=25.6532066508314, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI189571643, Length=384, Percent_Identity=25.2604166666667, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI189571641, Length=384, Percent_Identity=25.2604166666667, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI189571638, Length=384, Percent_Identity=25.2604166666667, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI189571636, Length=384, Percent_Identity=25.2604166666667, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI53831991, Length=410, Percent_Identity=24.8780487804878, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI240255483, Length=376, Percent_Identity=25.2659574468085, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI29789100, Length=376, Percent_Identity=25.2659574468085, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI240255478, Length=376, Percent_Identity=25.2659574468085, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI5360208, Length=307, Percent_Identity=27.0358306188925, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI157266309, Length=446, Percent_Identity=23.9910313901345, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI71852584, Length=437, Percent_Identity=24.7139588100687, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI71852586, Length=113, Percent_Identity=38.9380530973451, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI262118210, Length=343, Percent_Identity=25.0728862973761, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI109389362, Length=217, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI45430057, Length=395, Percent_Identity=23.7974683544304, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4503899, Length=384, Percent_Identity=24.21875, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI59797060, Length=227, Percent_Identity=29.0748898678414, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI58743319, Length=113, Percent_Identity=33.6283185840708, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI31742482, Length=111, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1790112, Length=497, Percent_Identity=98.1891348088531, Blast_Score=1033, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17568795, Length=371, Percent_Identity=27.2237196765499, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17559078, Length=111, Percent_Identity=32.4324324324324, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI19922168, Length=366, Percent_Identity=26.5027322404372, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24653364, Length=366, Percent_Identity=26.775956284153, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24647401, Length=395, Percent_Identity=24.3037974683544, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24666109, Length=306, Percent_Identity=24.1830065359477, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281366397, Length=369, Percent_Identity=23.8482384823848, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281366395, Length=369, Percent_Identity=23.8482384823848, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666163, Length=369, Percent_Identity=23.8482384823848, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363223, Length=376, Percent_Identity=22.0744680851064, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666175, Length=380, Percent_Identity=25.2631578947368, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 57351; Mature: 57351

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLF
CCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHCCEECCCCEECCCCCCCHHHHHE
TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
DYWFDGANYFSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA
CCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
DEPFLMVISYDEPHHPFTCPVEYLEKYTDFYYELGEKAEDDLANKPEHHRLWAQAMPSPV
CCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA
CCCCCEECCHHEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCH
MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRG
HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
VLVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIHF
EEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH
ADVRSKMHDALLDYMDKIRDPFRSYQWNLRPWRKDAQPRWMGAFRPRPQDGYSPVVRDYD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
TGLPTQGVKVEEKKQKF
CCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLF
CCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHCCEECCCCEECCCCCCCHHHHHE
TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
DYWFDGANYFSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA
CCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
DEPFLMVISYDEPHHPFTCPVEYLEKYTDFYYELGEKAEDDLANKPEHHRLWAQAMPSPV
CCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA
CCCCCEECCHHEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCH
MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRG
HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
VLVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIHF
EEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH
ADVRSKMHDALLDYMDKIRDPFRSYQWNLRPWRKDAQPRWMGAFRPRPQDGYSPVVRDYD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
TGLPTQGVKVEEKKQKF
CCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]