| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is kbaY [H]
Identifier: 218691942
GI number: 218691942
Start: 4267739
End: 4268590
Strand: Reverse
Name: kbaY [H]
Synonym: ECED1_4344
Alternate gene names: 218691942
Gene position: 4268590-4267739 (Counterclockwise)
Preceding gene: 218691943
Following gene: 218691941
Centisome position: 81.94
GC content: 55.28
Gene sequence:
>852_bases ATGTTTGCCGATATGAAAAGTATGGTGATGAAAGCCTGGCATGAACATTACGCCTTGCTGGCGATCAACTGTATGAATCT GGAAAGTGCTCACGCAGCTATCCGCGTGGCGGAGAAGAATCGCGCTCCGATCATTCTCAATCTCTATCAGGGGCATCTGG CGCATTTTCCTGCCCCCGTCGCGGCGGCAGTGGTTAAAACGCTCGCGGAATCTGCCTCAGTACCGGTCGCTCTGGCGCTT GATCATGGCAAAAATCCGGACTGTATTCGTCAGGCGTTTCGTGCTGGTTTCAGCGGATTAATGATTGATGCTTCTGCTTT TCCCCTGGAGGAAAACGTGCGCCAGACCAGGGCGGTGGTGGAACTCGCCGCCAGCGCGCAGCTCTGCGTGGAAGGTGAAC TGGGCCATCTGGCAGATGCGCCGCGTTATGACCAGGCCGCCAATGCAGACATGATGACGCAACCCACTGATGTGGAACCG TTTATCGTGCAGACAGGCATTGATCTACTGGCCGTTTCGGTAGGCACGGCGCACGGCATGTACGCGCCTGGTGTTGTACC TGCTATTGATTTTCAGCGTCTGGCGGAGATTTTCCACTGCTCGAGCGTGCCTCTGGCATTACATGGCGGTAGCGGTACGC CGTTCGATCAGCTCCAGCTCTGTACGACTCTGGGGGTAGCAAAAATCAACGTGGGGGCGGCCATTTTTGAACGGGGGAAA TCTGCGCTCCTGCATACCCTCTGTCACGATATATCCATTGAACTGGTGGACGCGCTGAAAGCTATGGAACTGGCCTTCGA AGAAGCGATTACACCGTATTTACAGGCGAGCGGCTCTATCGGCAAAGCCTGA
Upstream 100 bases:
>100_bases AGAAACCGGTAACGGAACGCGACGAAGAGTTTGACGAACTGAGCGATCAAAAGCTGAAAGATGAAGAGATCACTTTCACC CTCGAATAACCGGAGGCCCT
Downstream 100 bases:
>100_bases TTCATTTTCTGTCATGGCCTTTATGCCAGTGCAATAACGCACCGGCAGGGCGGACTACACGCTGAAACTGGAGATTTAAC ATGTTAGTTTCGATGAAAGA
Product: putative sugar aldolase
Products: NA
Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPVAAAVVKTLAESASVPVALAL DHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVVELAASAQLCVEGELGHLADAPRYDQAANADMMTQPTDVEP FIVQTGIDLLAVSVGTAHGMYAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA
Sequences:
>Translated_283_residues MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPVAAAVVKTLAESASVPVALAL DHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVVELAASAQLCVEGELGHLADAPRYDQAANADMMTQPTDVEP FIVQTGIDLLAVSVGTAHGMYAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA >Mature_283_residues MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPVAAAVVKTLAESASVPVALAL DHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVVELAASAQLCVEGELGHLADAPRYDQAANADMMTQPTDVEP FIVQTGIDLLAVSVGTAHGMYAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA
Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase KbaYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase KbaY subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=232, Percent_Identity=37.5, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI87082041, Length=280, Percent_Identity=34.2857142857143, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1788072, Length=231, Percent_Identity=33.7662337662338, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI1789293, Length=275, Percent_Identity=29.0909090909091, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000771 - InterPro: IPR011288 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.40 [H]
Molecular weight: Translated: 30092; Mature: 30092
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPV CCCCHHHHHHHHHHHCEEEEEEEECCCHHHHHHEEEECCCCCCEEEEECCCHHHHCCHHH AAAVVKTLAESASVPVALALDHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVV HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH ELAASAQLCVEGELGHLADAPRYDQAANADMMTQPTDVEPFIVQTGIDLLAVSVGTAHGM HHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHEEEECCCCCCC YAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK CCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPV CCCCHHHHHHHHHHHCEEEEEEEECCCHHHHHHEEEECCCCCCEEEEECCCHHHHCCHHH AAAVVKTLAESASVPVALALDHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVV HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH ELAASAQLCVEGELGHLADAPRYDQAANADMMTQPTDVEPFIVQTGIDLLAVSVGTAHGM HHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHEEEECCCCCCC YAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK CCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA