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The map label for this gene is gspC [H]

Identifier: 218691609

GI number: 218691609

Start: 3896965

End: 3897780

Strand: Direct

Name: gspC [H]

Synonym: ECED1_3989

Alternate gene names: 218691609

Gene position: 3896965-3897780 (Clockwise)

Preceding gene: 218691577

Following gene: 218691610

Centisome position: 74.8

GC content: 41.54

Gene sequence:

>816_bases
GTGCCCACACTACCTTTCCCTTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAG
CATAGGGTTGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGAACAGATCATTAATCAACCAACAA
ATGCATTTCAGTCTGAATTCAGCCTTGCCGCTTTATGGCGCAACGAAAATCATGCTGGGGTAAAAGATGCAAATCCCGTG
GCAGTTAATCAGGAAACACCTAAGCTCTCTATAGCGCTTAATGGCATTGTACTCACATCGAATGATGAGACTTCTTTTGT
CTTAATTAATGAGGGGAGCGAACAAAAGCGATACTCCCTCAACGAAGCCCTTGAGTCAGTGCCGGGAACGTTTATTAGAA
AAATAAATAAAACCAGCGTTGTGTTTGAAACTCACGGGCATTACGAAAAAGTAACTCTCCATCCAGGGCTACCTGACATC
ATCAAGCAGCCTGATTCGGAAAATCAAAATGTACTCGCTGATTATATTATCGCCACACCTATACGTGATGGAGAACAGAT
ATACGGTCTTCGATTGAATCCTCGTAAGGGTCTCAATGCATTTACCATCAGCTTGCTGCAACCTGGGGATATCGCCCTCA
GGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAG
TTTACAATTCGTCGCAACGGCGTACCCCGCTTGATAAATGTTTCCGTCGCGGAACTTACAGGAATGAATGGACAGCGCAA
TGAAGGGACTCAATAA

Upstream 100 bases:

>100_bases
ATATAAATAAATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCT
ATTTTATTAGAACATACATC

Downstream 100 bases:

>100_bases
AATCACCTGCTGCTTGCTGGCAGCACTACTTATGCCTTGTGCAGGGCACGCTGAGAACGAACAATACGGCGCTAACTTCA
ATAACGCCGATATCCGCCAG

Product: general secretory pathway component, cryptic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPTLPFPFHLANHNKDAAINILIIFISIGLIIFNVNYFHTTIVKNEQIINQPTNAFQSEFSLAALWRNENHAGVKDANPV
AVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESVPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDI
IKQPDSENQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTISLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
FTIRRNGVPRLINVSVAELTGMNGQRNEGTQ

Sequences:

>Translated_271_residues
MPTLPFPFHLANHNKDAAINILIIFISIGLIIFNVNYFHTTIVKNEQIINQPTNAFQSEFSLAALWRNENHAGVKDANPV
AVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESVPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDI
IKQPDSENQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTISLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
FTIRRNGVPRLINVSVAELTGMNGQRNEGTQ
>Mature_270_residues
PTLPFPFHLANHNKDAAINILIIFISIGLIIFNVNYFHTTIVKNEQIINQPTNAFQSEFSLAALWRNENHAGVKDANPVA
VNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESVPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDII
KQPDSENQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTISLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQF
TIRRNGVPRLINVSVAELTGMNGQRNEGTQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP C family [H]

Homologues:

Organism=Escherichia coli, GI1789721, Length=271, Percent_Identity=95.9409594095941, Blast_Score=493, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR001639 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30066; Mature: 29934

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01141 T2SP_C

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLPFPFHLANHNKDAAINILIIFISIGLIIFNVNYFHTTIVKNEQIINQPTNAFQSEF
CCCCCCCEEECCCCCCHHEEEEHHHHHHHHHEEECCHHEEEEEECCHHHCCCCHHHHHCC
SLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSL
EEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH
NEALESVPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSENQNVLADYIIATP
HHHHHHCCCHHHHHCCCCEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCEEEEEEEECC
IRDGEQIYGLRLNPRKGLNAFTISLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
CCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCE
FTIRRNGVPRLINVSVAELTGMNGQRNEGTQ
EEEECCCCCEEEEEEEHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PTLPFPFHLANHNKDAAINILIIFISIGLIIFNVNYFHTTIVKNEQIINQPTNAFQSEF
CCCCCCEEECCCCCCHHEEEEHHHHHHHHHEEECCHHEEEEEECCHHHCCCCHHHHHCC
SLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSL
EEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH
NEALESVPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSENQNVLADYIIATP
HHHHHHCCCHHHHHCCCCEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCEEEEEEEECC
IRDGEQIYGLRLNPRKGLNAFTISLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQ
CCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCE
FTIRRNGVPRLINVSVAELTGMNGQRNEGTQ
EEEECCCCCEEEEEEEHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]