Click here to switch to the map view.

The map label for this gene is yhdE

Identifier: 218691529

GI number: 218691529

Start: 3830037

End: 3830630

Strand: Reverse

Name: yhdE

Synonym: ECED1_3897

Alternate gene names: 218691529

Gene position: 3830630-3830037 (Counterclockwise)

Preceding gene: 218691530

Following gene: 218691528

Centisome position: 73.53

GC content: 54.21

Gene sequence:

>594_bases
ATGACTTCTCTGTATTTAGCTTCCGGTTCTCCGCGTCGTCAGGAGTTACTTGCGCAACTTGGCGTGACCTTTGAACGTAT
TGTTACGGGCATTGAGGAGCAGCGTCAGCCGCAGGAGAGCGCGCAGCAGTATGTTGTGCGTCTGGCGCGCGAGAAAGCAC
AGGCGGGTGTCGCGCAAACGGCGCAGGATCTCCCGGTGCTGGGTGCGGATACTATCGTTATCCTGAACGGAGAAGTGCTC
GAGAAACCGCGCGACGCAGAGCATGCGGCGCAGATGTTGCGCAAATTATCGGGTCAGACCCATCAGGTGATGACGGCAGT
GGCGTTGGCTGACAGCCAGCACATTCTCGATTGCCTGGTGGTCACCGATGTGACTTTCAGAACGTTAACAGACGAAGACA
TCGCGGGCTATGTCGCCAGCGGCGAACCGTTAGATAAAGCAGGTGCATACGGTATTCAGGGGCTGGGTGGCTGTTTTGTC
AGGAAGATAAATGGCAGCTTTCACGCCGTAGTCGGCTTACCGCTGGTTGAAACGTATGAATTATTAAGTAATTTTAACGC
ACTGCGTGAGAAAAGGGATAAACATGACGGCTGA

Upstream 100 bases:

>100_bases
AAGTGTTCTGGAGTAGTGTAGTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGTAAAGTCCGTCAGCAGTTT
GCAGTGCAATAAAGGTTTCT

Downstream 100 bases:

>100_bases
ATTGTTGGTAAACGTAACGCCTTCGGAAACGCGAGTGGCGTATATTGATGGCGGTATTCTGCAGGAAATTCATATTGAAC
GTGAGGCGCGACGCGGAATA

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVL
EKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
RKINGSFHAVVGLPLVETYELLSNFNALREKRDKHDG

Sequences:

>Translated_197_residues
MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVL
EKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
RKINGSFHAVVGLPLVETYELLSNFNALREKRDKHDG
>Mature_196_residues
TSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVLE
KPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVR
KINGSFHAVVGLPLVETYELLSNFNALREKRDKHDG

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=185, Percent_Identity=43.2432432432432, Blast_Score=125, Evalue=2e-29,
Organism=Homo sapiens, GI291045183, Length=178, Percent_Identity=40.4494382022472, Blast_Score=111, Evalue=4e-25,
Organism=Homo sapiens, GI291045181, Length=145, Percent_Identity=44.8275862068966, Blast_Score=105, Evalue=2e-23,
Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=49.1525423728814, Blast_Score=104, Evalue=4e-23,
Organism=Escherichia coli, GI1789646, Length=197, Percent_Identity=97.9695431472081, Blast_Score=394, Evalue=1e-111,
Organism=Escherichia coli, GI87081830, Length=185, Percent_Identity=36.2162162162162, Blast_Score=105, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=36.4583333333333, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI78706856, Length=177, Percent_Identity=40.6779661016949, Blast_Score=123, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCEF2_ECOL5 (Q0TCL8)

Other databases:

- EMBL:   CP000247
- RefSeq:   YP_671212.1
- ProteinModelPortal:   Q0TCL8
- SMR:   Q0TCL8
- STRING:   Q0TCL8
- EnsemblBacteria:   EBESCT00000048315
- GeneID:   4190145
- GenomeReviews:   CP000247_GR
- KEGG:   ecp:ECP_3331
- eggNOG:   COG0424
- GeneTree:   EBGT00050000009856
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- PhylomeDB:   Q0TCL8
- ProtClustDB:   PRK00032
- BioCyc:   ECOL362663:ECP_3331-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21414; Mature: 21282

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: ACT_SITE 33-33

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT
CCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLV
HHCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH
VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSFHAVVGLPLVETYE
HHHHHHHHCCCHHHHCEECCCCCCHHHCCCCCCCCCHHHEEEECCCEEEEECCCHHHHHH
LLSNFNALREKRDKHDG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT
CEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLV
HHCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH
VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSFHAVVGLPLVETYE
HHHHHHHHCCCHHHHCEECCCCCCHHHCCCCCCCCCHHHEEEECCCEEEEECCCHHHHHH
LLSNFNALREKRDKHDG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA