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The map label for this gene is ygiV [H]

Identifier: 218691320

GI number: 218691320

Start: 3607387

End: 3607869

Strand: Reverse

Name: ygiV [H]

Synonym: ECED1_3680

Alternate gene names: 218691320

Gene position: 3607869-3607387 (Counterclockwise)

Preceding gene: 218691321

Following gene: 218691319

Centisome position: 69.25

GC content: 52.8

Gene sequence:

>483_bases
ATGACAAACCTGACACTGGATGTAAATATTATCGATTTCCCATCAATCCCTGTGGCGATGTTGCCGCACCGCTGTAGCCC
TGAGTTGCTCAACTACAGCGTGGCGAAATTTATCATGTGGCGTAAAGAGACGGGGCTTTCTCCTGTTAACCAAAGCCAGA
CTTTTGGCGTCGCCTGGGACGACCCTGCCACCACCGCACCGGAAGCGTTTCGCTTTGATATCTGCGGCAGCGTTAGCGAA
TCGATCCCCGATAATCGTTATGGCGTGAGTAATGGCGAACTTACCGGTGGGCGTTATGCTGTTGCCCGCCATGTTGGCGA
GCTGGACGATATTTCACACACGATATGGGGCATCATTCGCCACTGGCTACCTGCAAGCGGCGAAAAAATGCGCAAAGCCC
CGATCCTGTTTCACTACATCAATCTTGCCGAAGGGATGACAGAGCGGCGACTGGAAACGGATATTTATGTGCCGTTGGCG
TGA

Upstream 100 bases:

>100_bases
AACTCTGTTGAAATTGACGTCAAACAGATCCGCAAAGTAAATCCGTAATTGTTACCGCTCCCGGGACGCGTTCCCGGGAA
TAATTTCGCAGGGAGGCAAA

Downstream 100 bases:

>100_bases
TGGGGAATCTTTACCGGAGTGTGAGCCAAATCACTCGCGATAAGTTTGAGCAAACAATGCCACAGGCGTATTGTTGTCGG
GCTTATAATTTCTCCGGTAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSE
SIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYINLAEGMTERRLETDIYVPLA

Sequences:

>Translated_160_residues
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSE
SIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYINLAEGMTERRLETDIYVPLA
>Mature_159_residues
TNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSES
IPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYINLAEGMTERRLETDIYVPLA

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=160, Percent_Identity=96.25, Blast_Score=327, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 17918; Mature: 17786

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD
CCCEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
DPATTAPEAFRFDICGSVSESIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR
CCCCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
HWLPASGEKMRKAPILFHYINLAEGMTERRLETDIYVPLA
HHCCCCCCHHHCCCHHEEHHHHHHCHHHHHCCCCEEEECC
>Mature Secondary Structure 
TNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD
CCEEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
DPATTAPEAFRFDICGSVSESIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR
CCCCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
HWLPASGEKMRKAPILFHYINLAEGMTERRLETDIYVPLA
HHCCCCCCHHHCCCHHEEHHHHHHCHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]