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The map label for this gene is ygiK [H]

Identifier: 218691314

GI number: 218691314

Start: 3599411

End: 3600745

Strand: Direct

Name: ygiK [H]

Synonym: ECED1_3674

Alternate gene names: 218691314

Gene position: 3599411-3600745 (Clockwise)

Preceding gene: 218691313

Following gene: 218691322

Centisome position: 69.09

GC content: 45.39

Gene sequence:

>1335_bases
TTGACAACTATCGTAAACGGAATTCTCATTAACGAGGGAAATATGGAATTTGAATATATCTACCCCGTCTTAATTTTATT
TGGCAGTTTTGCCGTCATGCTGGCAATAGGTGTGCCAATTACTTTTGCGATTGGTCTTTCTTCGCTGTTATCTATTATTA
CTGCCTTGCCACCCGATGCCGCCATTTCTGTTATTTCACAAAAAATGACTGTAGGGCTGGATGGCTTTACGCTATTAGCC
ATTCCCTTCTTCGTGTTAGCCGGAAACATTATGAATACCGGTGGTATAGCCAGACGACTGGTTAACCTGGCGCAAGCATT
AGTTGGGCGTCTTCCTGGCTCACTGGCTCATTGTAATATCCTCGCGAATACACTGTTTGGTGCGATTTCAGGTTCAGCCG
TTGCGTCAGCCGCAGCGGTAGGTGGGATTATGTCACCACTGCAAGATGATCCGGCGTTTTCAGCAGCGGTTAATATTGCC
TCTGCCCCCATTGGCCTGATGATCCCACCGAGCAATGTGTTGATTGTTTATTCCCTCGCCAGTGGCGGGACTTCTGTCGC
TGCGTTGTTCTTAGCTGGATATCTGCCGGGCATCCTCACCGCTGTTGCCTTAATGTTTGTAGCTGCACTTTATGCACGAC
GTCACCATTACCCAGTGGCCGAACGCATCAATTACCGTCAGTTTTTACAGGTATTCCGCGAATCAATTCCTAGCCTGATG
CTTATTTTTATCATTATTGGCGGTATTATCGCAGGGGTATTTACGCCCACAGAAGCATCAGCAATAGCGGTAATTTATAG
TTTAGCCCTGGCGATGATTTACCGGGAAATCACTCTTAAGAAGCTCAATGATATTCTGTTAGATTCGGTAGTAACCAGTT
CAATTGTTCTGTTACTGGTAGGCTGTTCAATGGGAATGTCATGGGCCATGACGAATGCTGATGTTCCTGAGTTGATCAAC
GAACTGATTACCCGCGTTTCGGATAACAAATGGGTCATTCTGTTTATTATCAATATCATTCTGTTGATCGTCGGTACCTT
TATGGATATCACGCCGGCGATCCTGATATTTACACCTATTTTCCTGCCGATCGCCCAGCATCTGGGGATTGATCCGATTC
ACTTCGGCATAATTATGGTTTTCAACTTAACCATTGGCCTTTGCACACCACCTGTCGGCACCATTCTGTTTGTGGGGTGC
AGCATTGGTAAGGTCAGTATCGACAGGGCAATAAAACCATTACTGCCGATGTTTCTGGCATTGTTTGTAGTAATGGCAAT
TATTTGTTATTTCCCGCAGCTTAGTCTGATGCTGCCAGGATTATTTTCGACCTGA

Upstream 100 bases:

>100_bases
GGACAAATCTCTCCAGTATTAAAATGGCCAATGGATAAAGTATATTGGGTTATGCCTGTCAGTGGGCTTATTCTGGTCTG
GTATTCAGTAATGAATATTA

Downstream 100 bases:

>100_bases
TACACAATGAAGACTGCATACTGAGTAATTTTCAATGCCCCACCACTCTGTGGGGCATTGAATTGGTCCATTACGGTACC
GGATTGACCAACAGTTGCCC

Product: c4-dicarboxylate permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLDGFTLLA
IPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAVASAAAVGGIMSPLQDDPAFSAAVNIA
SAPIGLMIPPSNVLIVYSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIPSLM
LIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAMTNADVPELIN
ELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGC
SIGKVSIDRAIKPLLPMFLALFVVMAIICYFPQLSLMLPGLFST

Sequences:

>Translated_444_residues
MTTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLDGFTLLA
IPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAVASAAAVGGIMSPLQDDPAFSAAVNIA
SAPIGLMIPPSNVLIVYSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIPSLM
LIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAMTNADVPELIN
ELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGC
SIGKVSIDRAIKPLLPMFLALFVVMAIICYFPQLSLMLPGLFST
>Mature_443_residues
TTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLDGFTLLAI
PFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAVASAAAVGGIMSPLQDDPAFSAAVNIAS
APIGLMIPPSNVLIVYSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIPSLML
IFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAMTNADVPELINE
LITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGCS
IGKVSIDRAIKPLLPMFLALFVVMAIICYFPQLSLMLPGLFST

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=418, Percent_Identity=36.8421052631579, Blast_Score=238, Evalue=6e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 47157; Mature: 47025

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDA
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
AISVISQKMTVGLDGFTLLAIPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNI
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LANTLFGAISGSAVASAAAVGGIMSPLQDDPAFSAAVNIASAPIGLMIPPSNVLIVYSLA
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEEC
SGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIPSLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
LIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCSMGMSWAMTNADVPELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPI
HHHCCCCEEECCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGCSIGKVSIDRAIKPLLPMFLA
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFVVMAIICYFPQLSLMLPGLFST
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDA
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
AISVISQKMTVGLDGFTLLAIPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNI
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LANTLFGAISGSAVASAAAVGGIMSPLQDDPAFSAAVNIASAPIGLMIPPSNVLIVYSLA
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEEC
SGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIPSLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
LIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCSMGMSWAMTNADVPELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPI
HHHCCCCEEECCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGCSIGKVSIDRAIKPLLPMFLA
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFVVMAIICYFPQLSLMLPGLFST
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]