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The map label for this gene is pduB [H]

Identifier: 218691115

GI number: 218691115

Start: 3397084

End: 3397869

Strand: Direct

Name: pduB [H]

Synonym: ECED1_3457

Alternate gene names: 218691115

Gene position: 3397084-3397869 (Clockwise)

Preceding gene: 218691114

Following gene: 218691116

Centisome position: 65.21

GC content: 50.89

Gene sequence:

>786_bases
ATGAGAGATAATCTTGTTGAGCAGATTATATCTGACGTAATGAATAAACAAACCGATATCTCACCGGAAGCTAAAACAGC
AGCAAATTTCGCTGGTTGCGGTATTACGGAATTTGTCGGCACTGCGTTGGGCCACACTATCGGCCTAGTGATTGCCAATG
TTGATAATCAATTGCATGAAGTCATGAATATCGACAAGAAATATCGCTCTATCGGTATTCTTGGCGCACGTACTGGCGCA
GGCCCGCAAATTTTTGCGGCTGACGAAGCGATTAAAGCAACCAACAGCGAAATTATTTCTATTGAGCTGGCCCGCGATAC
CGAAGGAGGTGGCGGACACGGTTGCTTAATTATTTTTGGTGCGTCTGATGTTTCCGACGTCAGGCGTGCGGTTGAAGTGG
CGCTGTCTGAAATTGAACGCACCATGGGTGACGTTTATGGCTCGTCAGCCGGACATCTTGAATTCCAGTACACCGCTCGT
GCCAGCTACGCGCTGAATAAAGCGCTGGGTGCGCCGATTGGTAAATCCTTCGGGATGACCTGTGCCTCGCCTGCGGCGAT
TGGCCTAGTGATTGCCGACGCTGCGGCGAAATCCGCCGTGATTGACCCGGTGGGTTATGCCAGCCCGTCGCAAGGCACCA
GTTTTAGTAACGAAGTGATCTTCACCTTCTCCGGTGATTCCGGTGCAGTACGTCAGGCGGTGATTGCCGCGCGTGAAGTC
GGTCTACAACTGCTCTCCACGTTAGATCCGGTGGAAATTAAATCCACCACGACGCCATATATCTAA

Upstream 100 bases:

>100_bases
GGGAGAACTGGTCTCCGTACATGTTATTCCACGCCCACACATTGAGGTGGAAAAAATTCTACCGAAGGCTATCGGTTAAT
AACAATAAAGGATACTGATC

Downstream 100 bases:

>100_bases
GCATCTGATGACGATGCACGCGGCGCGGTCGGTAGATGAAGAGTAGTAAGGAATTTAAAGATGAATGATATTGAAATCGC
TCAGGCTGTCTCGACCATCC

Product: putative propanediol utilization protein, polyhedral bodies (pduB-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRDNLVEQIISDVMNKQTDISPEAKTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHEVMNIDKKYRSIGILGARTGA
GPQIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFGASDVSDVRRAVEVALSEIERTMGDVYGSSAGHLEFQYTAR
ASYALNKALGAPIGKSFGMTCASPAAIGLVIADAAAKSAVIDPVGYASPSQGTSFSNEVIFTFSGDSGAVRQAVIAAREV
GLQLLSTLDPVEIKSTTTPYI

Sequences:

>Translated_261_residues
MRDNLVEQIISDVMNKQTDISPEAKTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHEVMNIDKKYRSIGILGARTGA
GPQIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFGASDVSDVRRAVEVALSEIERTMGDVYGSSAGHLEFQYTAR
ASYALNKALGAPIGKSFGMTCASPAAIGLVIADAAAKSAVIDPVGYASPSQGTSFSNEVIFTFSGDSGAVRQAVIAAREV
GLQLLSTLDPVEIKSTTTPYI
>Mature_261_residues
MRDNLVEQIISDVMNKQTDISPEAKTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHEVMNIDKKYRSIGILGARTGA
GPQIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFGASDVSDVRRAVEVALSEIERTMGDVYGSSAGHLEFQYTAR
ASYALNKALGAPIGKSFGMTCASPAAIGLVIADAAAKSAVIDPVGYASPSQGTSFSNEVIFTFSGDSGAVRQAVIAAREV
GLQLLSTLDPVEIKSTTTPYI

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4816

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutL/PduB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009193
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 27114; Mature: 27114

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDNLVEQIISDVMNKQTDISPEAKTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHE
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCHHHHH
VMNIDKKYRSIGILGARTGAGPQIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFG
HHHHHHHHHHEEEEECCCCCCCEEEECCHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEC
ASDVSDVRRAVEVALSEIERTMGDVYGSSAGHLEFQYTARASYALNKALGAPIGKSFGMT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCC
CASPAAIGLVIADAAAKSAVIDPVGYASPSQGTSFSNEVIFTFSGDSGAVRQAVIAAREV
CCCCHHHHEEEECHHHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
GLQLLSTLDPVEIKSTTTPYI
HHHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure
MRDNLVEQIISDVMNKQTDISPEAKTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHE
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCHHHHH
VMNIDKKYRSIGILGARTGAGPQIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFG
HHHHHHHHHHEEEEECCCCCCCEEEECCHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEC
ASDVSDVRRAVEVALSEIERTMGDVYGSSAGHLEFQYTARASYALNKALGAPIGKSFGMT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCC
CASPAAIGLVIADAAAKSAVIDPVGYASPSQGTSFSNEVIFTFSGDSGAVRQAVIAAREV
CCCCHHHHEEEECHHHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
GLQLLSTLDPVEIKSTTTPYI
HHHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8071226; 9352910; 11677609 [H]