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The map label for this gene is yeiN [H]

Identifier: 218690315

GI number: 218690315

Start: 2539966

End: 2540904

Strand: Reverse

Name: yeiN [H]

Synonym: ECED1_2613

Alternate gene names: 218690315

Gene position: 2540904-2539966 (Counterclockwise)

Preceding gene: 218690316

Following gene: 218690314

Centisome position: 48.77

GC content: 46.75

Gene sequence:

>939_bases
ATGTCTGAATTAACTCTGTCCCCTGAATTATTACAAATATCCGCTGAAGTACAGGATGCTTTAAAAAATAAAAAACCGGT
TGTTGCGCTGGAATCGACCATAATTTCTCACGGAATGCCATTCCCACAAAATGCCCAAACCGCAATTGAAGTAGAAGAAA
CAATTCGTAAACAGGGCGCAGTACCAGCCACTATCGCCATTATTGGCGGTGTGATGAAAGTGGGCTTAAGTAAAGAAGAA
ATCGAATTGCTGGGCCGTGAAGGACATAACGTGACGAAAGTTAGTCGTCGTGATTTACCTTTTGTCGTTGCTGCAGGGAA
AAATGGCGCGACTACTGTTGCATCAACCATGATTATTGCAGCACTGGCTGGGATTAAAGTTTTTGCAACCGGAGGTATTG
GTGGTGTGCATCGCGGAGCGGAACATACCTTCGATATTTCTGCCGATTTACAGGAACTGGCAAATACCAATGTCACTGTT
GTTTGTGCGGGGGCAAAATCTATTCTCGATTTAGGATTAACAACAGAATATTTAGAAACCTTCGGTGTACCGTTAATTGG
TTATCAGACAAAAGCGCTGCCTGCGTTTTTCTGCCGAACCAGCCCATTTGATGTCAGCATTCGTCTCGACAGTGCCCGCG
AAATTGCTCGCGCGATGGCAGTGAAGTGGCAAACCGGTTTGAACGGCGGCCTGGTGGTAGCGAACCCGATCCCGGAACAG
TTTGCGATGCCAGAAGAAACCATCAATGCAGCAATTGATCAAGCCGTTGCTGAAGCCGAAGAACAGGGTGTTATTGGGAA
AGAGAGTACACCGTTCCTGCTGGCGCGTGTTGCGGAGCTAACCGGCGGTGATAGCCTGAAATCCAATATTCAACTGGTCT
TTAATAACGCCATTCTGGCGAGCGAAATTGCCAAAGAATATCAGCGTCTCGTGGGTTAA

Upstream 100 bases:

>100_bases
GATTTGCGCAGGGATGTTCGTCAATGGCACTTGCCTGTGAATATACCAACAACCCTGAATTATCAATTGCCAATGTTACA
TCGTTAGTGGAGAACACAGA

Downstream 100 bases:

>100_bases
TTTCTGGTGGGCAGAAAGCCGTCGCCCGTACTCATCAAACATACCAAAACCTGGCGCTGACGCCGGGTTTACTGGCATGA
AGGGAAAATCATTATGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: PsiMP glycosidase [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSELTLSPELLQISAEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEE
IELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQ
FAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLVG

Sequences:

>Translated_312_residues
MSELTLSPELLQISAEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEE
IELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQ
FAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLVG
>Mature_311_residues
SELTLSPELLQISAEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEI
ELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVV
CAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQF
AMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLVG

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. In vitro, can also catalyze the reverse reaction [H]

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family [H]

Homologues:

Organism=Escherichia coli, GI1788490, Length=312, Percent_Identity=97.1153846153846, Blast_Score=611, Evalue=1e-176,
Organism=Caenorhabditis elegans, GI25147470, Length=297, Percent_Identity=50.5050505050505, Blast_Score=275, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24580669, Length=295, Percent_Identity=51.864406779661, Blast_Score=284, Evalue=7e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022830
- InterPro:   IPR007342 [H]

Pfam domain/function: PF04227 Indigoidine_A [H]

EC number: NA

Molecular weight: Translated: 32990; Mature: 32859

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTLSPELLQISAEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
VPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHH
ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET
HHHCCEEEEECCCCCCCCCCCCEEECCHHHHHHCCCCEEEEECCHHHHHHHCCHHHHHHH
FGVPLIGYQTKALPAFFCRTSPFDVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQ
HCCCEECCCHHCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEEECCCCHH
FAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILA
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHCCEEEEECCHHHH
SEIAKEYQRLVG
HHHHHHHHHHCC
>Mature Secondary Structure 
SELTLSPELLQISAEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA
CCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
VPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHH
ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET
HHHCCEEEEECCCCCCCCCCCCEEECCHHHHHHCCCCEEEEECCHHHHHHHCCHHHHHHH
FGVPLIGYQTKALPAFFCRTSPFDVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQ
HCCCEECCCHHCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEEECCCCHH
FAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILA
HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHCCEEEEECCHHHH
SEIAKEYQRLVG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]