| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is mod [H]
Identifier: 218690017
GI number: 218690017
Start: 2240713
End: 2242611
Strand: Direct
Name: mod [H]
Synonym: ECED1_2295
Alternate gene names: 218690017
Gene position: 2240713-2242611 (Clockwise)
Preceding gene: 218690015
Following gene: 218690018
Centisome position: 43.01
GC content: 38.97
Gene sequence:
>1899_bases GTGGAATGGTCAATGAACAAACTTTCGCCTGAAATGCCCGAACTGCAATCAATGAATATCACTGCCGATAACATCACCAA GCTTAAATCATTGTTTCCTGAAGCCTTTAATGAAAACGGCATTGATTTTGACGTTTTAAAACAGCTTTTGGGTGAAAATG TAGACGAAAAAGAAGAACGCTATGGCCTGAACTGGCATGGTAAGCGTCAGGCTCGTCAGCTTGCTCTTACCCCTTCCCGT GGCACCTTACGCCCATGTAAAGATGAAAGTGTTGATTGGCATAACACCAAAAACCTCATGATCGAAGGTGATAACCTTGA AGTGTTAAAGCTTCTTCAAAAAAGTTATGCCGGAAAAGTGAAGCTTATTTACATCGATCCGCCTTACAATACCGGTAAAG ATTTTGTCTATCCTGACAACTTCCAAGATAATATGAAAAATTATCTTGAAATTACTGGACAGACAGAAGACGGAGCACGT TTAAGCACAAATACAGAAACCAGTGGGCGTTACCATACTGATTGGTTAAATATGATTTACCCACGTTTAAAACTTGCAAG AAACTTGTTGAAAGAAGATGGGGTTATTTTCATTTCCATTGATGATACTGAAGTTGATAATTTAAAAAAAGTTTGCTCGG AAATTTTTGGTGAAGAGAACTTTGTTGCTAATATTGTATGGCAAAAAAAGTACTCACCACAAAATGATGCAACATATTTT AGTGATATGCATGATCATATTTTAGTATATGCAAAGCAACGGAAGAGTTCAAAAAATGATTCAAACGGTTGGAACATAGA TTTTCTACCAAGATCAGACGAACAAAATGCAGCATATAAAAACCCCGACAATGACCCTCGTGGAGTGTGGAAGTCTGTAG ATTTATCAGTCAAAACTTATTCCAAGGCTAATGATTACTCAATTACCACACCATCAGGACGTATTGTAACTCCTCCCGCC AGTAGATGCTGGCAGGTTTCTGAAAAACGTTTTGTAGAATTGTGTAAAGAAAATAAAATTTGGTTTGGAGAAAATGGTAA TAATGTTCCATCAATCAAAAGATTCCTGACTGAGGTCCAAGATGGTGTTGTTCCTACAACATGGTGGTCATATAAAGAAT GTGGACATAATCAAGAGGCCAAGCAGGAACTAAAAAAACTCATGGAGGGAGAATCTGTATTCTTTGACACACCTAAGCCA TTGAGATTATTAGATAGAATATTACACTTAGCAACAACCAATGATAAAGATTGTATTATCCTAGATTTTTTCGCAGGGTC AGGTACCACGGCTCACGCAACTTTGAATAAAAATATTGCTGACAGTGGTTCACGCCGATATATTGCTGTGCAATTACCTG AAAAAATAGATGATGAAAAATACTATACAATATCAGAATTAACCAAAGAACGCCTCCGCCGCGCTGGTAAAAAGGTTCGT GAAGACAATCCAGAGTGGAAAGGTGATGTTGGTTTTCGTGTTTTCAAACTCGATACATCTAATATCCGTCCGTGGGAAGC CACAGCAGAAACCCTTTCAGAACAGATTGATGCCTATGTAAGCCCAATCCTTGAAGGCCGTAGTGAAGAAGATTTGCTCA CAGAGTTAATGCTAAAGCGTGGCATTGACTTGAGTGTAAACATTGAAATCCGTCAGTTTGATGGATTAACCGTTTCTTGC GTTGACGGTGGCAAATTGTTTACCTGCTTTGCTAAACAAATCCCTGCATCTTCAGTAGAAGAACTGACCAAGGGGATCAT CGACTGGCATAAGAGTTTAAAAGTTGGGAAAGATACGGTCTGCTATTTCCTAGATGATGCGTTTGAAAATAACGTCGCCA AAACAAATCTTTGCGCCATTCTGGAACAACACGGCCTGACTAACCTGCACAGCCTGTAA
Upstream 100 bases:
>100_bases CATAATGATTTAAAAAGAAATCTGTAGCACACTGTTCATTGATGAAATGCACTATTTACCGTAAAATATCCCCCATCACA CAGTAACCTGATACAGATAC
Downstream 100 bases:
>100_bases GGGAATGAGATGAAACTACATTTTGAATCTGACCTTACCTATCAGCAAAACGCCATAACTTCGGTCTGTGATTTGTTTGT GGGACAGGAGAAGTGGGAGA
Product: site-specific DNA-methyltransferase, component of type III restriction-modification system
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MEWSMNKLSPEMPELQSMNITADNITKLKSLFPEAFNENGIDFDVLKQLLGENVDEKEERYGLNWHGKRQARQLALTPSR GTLRPCKDESVDWHNTKNLMIEGDNLEVLKLLQKSYAGKVKLIYIDPPYNTGKDFVYPDNFQDNMKNYLEITGQTEDGAR LSTNTETSGRYHTDWLNMIYPRLKLARNLLKEDGVIFISIDDTEVDNLKKVCSEIFGEENFVANIVWQKKYSPQNDATYF SDMHDHILVYAKQRKSSKNDSNGWNIDFLPRSDEQNAAYKNPDNDPRGVWKSVDLSVKTYSKANDYSITTPSGRIVTPPA SRCWQVSEKRFVELCKENKIWFGENGNNVPSIKRFLTEVQDGVVPTTWWSYKECGHNQEAKQELKKLMEGESVFFDTPKP LRLLDRILHLATTNDKDCIILDFFAGSGTTAHATLNKNIADSGSRRYIAVQLPEKIDDEKYYTISELTKERLRRAGKKVR EDNPEWKGDVGFRVFKLDTSNIRPWEATAETLSEQIDAYVSPILEGRSEEDLLTELMLKRGIDLSVNIEIRQFDGLTVSC VDGGKLFTCFAKQIPASSVEELTKGIIDWHKSLKVGKDTVCYFLDDAFENNVAKTNLCAILEQHGLTNLHSL
Sequences:
>Translated_632_residues MEWSMNKLSPEMPELQSMNITADNITKLKSLFPEAFNENGIDFDVLKQLLGENVDEKEERYGLNWHGKRQARQLALTPSR GTLRPCKDESVDWHNTKNLMIEGDNLEVLKLLQKSYAGKVKLIYIDPPYNTGKDFVYPDNFQDNMKNYLEITGQTEDGAR LSTNTETSGRYHTDWLNMIYPRLKLARNLLKEDGVIFISIDDTEVDNLKKVCSEIFGEENFVANIVWQKKYSPQNDATYF SDMHDHILVYAKQRKSSKNDSNGWNIDFLPRSDEQNAAYKNPDNDPRGVWKSVDLSVKTYSKANDYSITTPSGRIVTPPA SRCWQVSEKRFVELCKENKIWFGENGNNVPSIKRFLTEVQDGVVPTTWWSYKECGHNQEAKQELKKLMEGESVFFDTPKP LRLLDRILHLATTNDKDCIILDFFAGSGTTAHATLNKNIADSGSRRYIAVQLPEKIDDEKYYTISELTKERLRRAGKKVR EDNPEWKGDVGFRVFKLDTSNIRPWEATAETLSEQIDAYVSPILEGRSEEDLLTELMLKRGIDLSVNIEIRQFDGLTVSC VDGGKLFTCFAKQIPASSVEELTKGIIDWHKSLKVGKDTVCYFLDDAFENNVAKTNLCAILEQHGLTNLHSL >Mature_632_residues MEWSMNKLSPEMPELQSMNITADNITKLKSLFPEAFNENGIDFDVLKQLLGENVDEKEERYGLNWHGKRQARQLALTPSR GTLRPCKDESVDWHNTKNLMIEGDNLEVLKLLQKSYAGKVKLIYIDPPYNTGKDFVYPDNFQDNMKNYLEITGQTEDGAR LSTNTETSGRYHTDWLNMIYPRLKLARNLLKEDGVIFISIDDTEVDNLKKVCSEIFGEENFVANIVWQKKYSPQNDATYF SDMHDHILVYAKQRKSSKNDSNGWNIDFLPRSDEQNAAYKNPDNDPRGVWKSVDLSVKTYSKANDYSITTPSGRIVTPPA SRCWQVSEKRFVELCKENKIWFGENGNNVPSIKRFLTEVQDGVVPTTWWSYKECGHNQEAKQELKKLMEGESVFFDTPKP LRLLDRILHLATTNDKDCIILDFFAGSGTTAHATLNKNIADSGSRRYIAVQLPEKIDDEKYYTISELTKERLRRAGKKVR EDNPEWKGDVGFRVFKLDTSNIRPWEATAETLSEQIDAYVSPILEGRSEEDLLTELMLKRGIDLSVNIEIRQFDGLTVSC VDGGKLFTCFAKQIPASSVEELTKGIIDWHKSLKVGKDTVCYFLDDAFENNVAKTNLCAILEQHGLTNLHSL
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 72319; Mature: 72319
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWSMNKLSPEMPELQSMNITADNITKLKSLFPEAFNENGIDFDVLKQLLGENVDEKEER CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH YGLNWHGKRQARQLALTPSRGTLRPCKDESVDWHNTKNLMIEGDNLEVLKLLQKSYAGKV CCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCE KLIYIDPPYNTGKDFVYPDNFQDNMKNYLEITGQTEDGARLSTNTETSGRYHTDWLNMIY EEEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCEEECCCCCCCCEEHHHHHHHH PRLKLARNLLKEDGVIFISIDDTEVDNLKKVCSEIFGEENFVANIVWQKKYSPQNDATYF HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHH SDMHDHILVYAKQRKSSKNDSNGWNIDFLPRSDEQNAAYKNPDNDPRGVWKSVDLSVKTY HCCCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEEE SKANDYSITTPSGRIVTPPASRCWQVSEKRFVELCKENKIWFGENGNNVPSIKRFLTEVQ CCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH DGVVPTTWWSYKECGHNQEAKQELKKLMEGESVFFDTPKPLRLLDRILHLATTNDKDCII CCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEE LDFFAGSGTTAHATLNKNIADSGSRRYIAVQLPEKIDDEKYYTISELTKERLRRAGKKVR EEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHH EDNPEWKGDVGFRVFKLDTSNIRPWEATAETLSEQIDAYVSPILEGRSEEDLLTELMLKR CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GIDLSVNIEIRQFDGLTVSCVDGGKLFTCFAKQIPASSVEELTKGIIDWHKSLKVGKDTV CCCEEEEEEEEEECCCEEEEECCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEE CYFLDDAFENNVAKTNLCAILEQHGLTNLHSL EEEEHHHHCCCCCHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MEWSMNKLSPEMPELQSMNITADNITKLKSLFPEAFNENGIDFDVLKQLLGENVDEKEER CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH YGLNWHGKRQARQLALTPSRGTLRPCKDESVDWHNTKNLMIEGDNLEVLKLLQKSYAGKV CCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCE KLIYIDPPYNTGKDFVYPDNFQDNMKNYLEITGQTEDGARLSTNTETSGRYHTDWLNMIY EEEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCEEECCCCCCCCEEHHHHHHHH PRLKLARNLLKEDGVIFISIDDTEVDNLKKVCSEIFGEENFVANIVWQKKYSPQNDATYF HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHH SDMHDHILVYAKQRKSSKNDSNGWNIDFLPRSDEQNAAYKNPDNDPRGVWKSVDLSVKTY HCCCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEEE SKANDYSITTPSGRIVTPPASRCWQVSEKRFVELCKENKIWFGENGNNVPSIKRFLTEVQ CCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH DGVVPTTWWSYKECGHNQEAKQELKKLMEGESVFFDTPKPLRLLDRILHLATTNDKDCII CCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEE LDFFAGSGTTAHATLNKNIADSGSRRYIAVQLPEKIDDEKYYTISELTKERLRRAGKKVR EEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHH EDNPEWKGDVGFRVFKLDTSNIRPWEATAETLSEQIDAYVSPILEGRSEEDLLTELMLKR CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GIDLSVNIEIRQFDGLTVSCVDGGKLFTCFAKQIPASSVEELTKGIIDWHKSLKVGKDTV CCCEEEEEEEEEECCCEEEEECCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEE CYFLDDAFENNVAKTNLCAILEQHGLTNLHSL EEEEHHHHCCCCCHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]