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The map label for this gene is int [H]

Identifier: 218690015

GI number: 218690015

Start: 2237821

End: 2239095

Strand: Direct

Name: int [H]

Synonym: ECED1_2293

Alternate gene names: 218690015

Gene position: 2237821-2239095 (Clockwise)

Preceding gene: 218690013

Following gene: 218690017

Centisome position: 42.96

GC content: 45.73

Gene sequence:

>1275_bases
ATGTCACTGACTGATATTAAAGCAAAAAATGCAAAACCCCTTGAGAAGGAATACAAGCTGACTGATGGCTTTGGTATGTT
CCTTCGTGTTACCCCTAAAGGTTCGAAATACTGGCAAATGGCTTACCGCTTCGAAGGGAAACAAAAACTCTTCTCTATTG
GTGTTTACCCTGCAGTTTCTCTTTCTGACGCAAGACAACGCCGTGACGAGGCCAGAAGGCTTCTGGCTCAGGGTATTGAC
CCTAATGCAAAGAAACAGGCAGAGGTTAAAGAGCTTAAAGCCAAACGTGATAATACACGCTCCTTCAGAACAGTAGCCAA
AGCGTGGTTCTCTACGAAAACAAAATGGTCTGATGATTATGGTGATGCCGTATGGAAGCGCCTTGAAACTTATGTCTTCC
CGGTAATCGGTGACAAAGATGTTGCCGAACTGGATACGGGTGATCTGCTGGTTCCGGTGAAAAAAGTGGAGGCACTTGGT
TATCTTGAAGTTGCCATGCGCATTCAACAATACATTACGGCAATCCTGCGTCATGCCGTCCAGCAAAAGCTGATACGCCA
TAACCCAGCCTATGATATGGAAGGTGCAGTTCAGAAACCACAAACTGAACACCGCCCTGCACTTGAGCTGGAAGAAATAC
CCCAGCTACTTAACAAAATTGCCGAATACAAAGGCCGCAGGTTAACCATACTGGCAATACAGCTCAATCTGATGATTTTC
ATTCGTTCCAGTGAGTTGCGTTTCGCTCGCTGGTCTGAAATTGATTTCAAAAGTAAGTTATGGGTGATACCCGAACAGCG
TGAAGCAATTGAAAACGTCAAACATTCGACTCGTGGGGCTAAAATGAAGCGTAAGCACTTCGTTCCCCTTTGTAAGCAGG
CCATGAAGATACTCAAAGAGATCCGACAACTGACTTATGAAGAAGGCCATGATGATGGATTAATCTTCACTGGCTGTTAT
GACTCGTTTAAACCCATGAGTGAAAACACCATCAACAAAGCCCTGCGTAATATGGGATATAACACGAAGCAGGACATCTG
TGGACACGGTTTCCGCACTCTGGCCTGTAGTGCCTTAATTGAGTCCGGGCTATGGTCAGAAGACGCTGTGGAGCTTCAAA
TGAGCCATAAGGAAAGCAACAGCGTCCGTGCTGCTTATACCCACAAGGCAAAACATCTTGAGCAACGTCGCCTGATGCTC
CAATGGTGGGCTGACTACCTTGATGCAAGCAGAAACGGTATGGTAAGGCCGTTTGAGTTTGCTACAAATAAATAA

Upstream 100 bases:

>100_bases
CGTTCACTAAAAACCACTCGAAGCCATATCATTTTGATGGTAAAAATGCTGGTAATGCTGGTTCGATTTCCCTTTTACCA
ACAAATGAGGGGGTGTTTTC

Downstream 100 bases:

>100_bases
AGGGAAAGGCCGTTCGCGGCCTTTCAACTTCATGCTTAATTACAGTCTATGCTGAATATGATACTGAATCTTTTTCTATC
GCTAAACCAGCGATTTTTTC

Product: Prophage integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSLTDIKAKNAKPLEKEYKLTDGFGMFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGID
PNAKKQAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELDTGDLLVPVKKVEALG
YLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHRPALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIF
IRSSELRFARWSEIDFKSKLWVIPEQREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCY
DSFKPMSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAAYTHKAKHLEQRRLML
QWWADYLDASRNGMVRPFEFATNK

Sequences:

>Translated_424_residues
MSLTDIKAKNAKPLEKEYKLTDGFGMFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGID
PNAKKQAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELDTGDLLVPVKKVEALG
YLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHRPALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIF
IRSSELRFARWSEIDFKSKLWVIPEQREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCY
DSFKPMSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAAYTHKAKHLEQRRLML
QWWADYLDASRNGMVRPFEFATNK
>Mature_423_residues
SLTDIKAKNAKPLEKEYKLTDGFGMFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDP
NAKKQAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELDTGDLLVPVKKVEALGY
LEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHRPALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFI
RSSELRFARWSEIDFKSKLWVIPEQREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYD
SFKPMSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAAYTHKAKHLEQRRLMLQ
WWADYLDASRNGMVRPFEFATNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788974, Length=416, Percent_Identity=36.0576923076923, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI145693166, Length=427, Percent_Identity=34.4262295081967, Blast_Score=215, Evalue=4e-57,
Organism=Escherichia coli, GI1788690, Length=407, Percent_Identity=29.97542997543, Blast_Score=214, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 49114; Mature: 48983

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDIKAKNAKPLEKEYKLTDGFGMFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVS
CCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHEEECCCCCCC
LSDARQRRDEARRLLAQGIDPNAKKQAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDY
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCH
GDAVWKRLETYVFPVIGDKDVAELDTGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAV
HHHHHHHHHHHEEEEECCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQKLIRHNPAYDMEGAVQKPQTEHRPALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIF
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE
IRSSELRFARWSEIDFKSKLWVIPEQREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKE
EECCCCCEEECCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IRQLTYEEGHDDGLIFTGCYDSFKPMSENTINKALRNMGYNTKQDICGHGFRTLACSALI
HHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHH
ESGLWSEDAVELQMSHKESNSVRAAYTHKAKHLEQRRLMLQWWADYLDASRNGMVRPFEF
HCCCCCCCHHHHEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHC
ATNK
CCCC
>Mature Secondary Structure 
SLTDIKAKNAKPLEKEYKLTDGFGMFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVS
CCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHEEECCCCCCC
LSDARQRRDEARRLLAQGIDPNAKKQAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDY
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCH
GDAVWKRLETYVFPVIGDKDVAELDTGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAV
HHHHHHHHHHHEEEEECCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQKLIRHNPAYDMEGAVQKPQTEHRPALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIF
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE
IRSSELRFARWSEIDFKSKLWVIPEQREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKE
EECCCCCEEECCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IRQLTYEEGHDDGLIFTGCYDSFKPMSENTINKALRNMGYNTKQDICGHGFRTLACSALI
HHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHH
ESGLWSEDAVELQMSHKESNSVRAAYTHKAKHLEQRRLMLQWWADYLDASRNGMVRPFEF
HCCCCCCCHHHHEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHC
ATNK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]