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The map label for this gene is yobA

Identifier: 218689779

GI number: 218689779

Start: 1993794

End: 1994168

Strand: Reverse

Name: yobA

Synonym: ECED1_2046

Alternate gene names: 218689779

Gene position: 1994168-1993794 (Counterclockwise)

Preceding gene: 218689783

Following gene: 218689778

Centisome position: 38.28

GC content: 49.07

Gene sequence:

>375_bases
ATGGCTTCAACTGCACGCTCCCTTCGCTACGCGCTGGCAATCCTGACCACTTCGTTGGTGACACCTTCCGTCTGGGCACA
TGCGCATTTAACGCATCAGTATCCTGCGGCAAATGCACAAGTGACAGCAGCTCCGCAGGCAATCACTTTAAACTTCTCGG
AAGGCGTTGAAACAGGATTCAGTGGTGCAAAAATCACGGGGCCAAAAAACGAAAATATTAAAACATTACCGGCGAAGCGG
AATGAGCAGGACCAAAAGCAACTGATTGTTCCACTGGCCGATTCGCTGAAACCCGGAACCTACACCGTTGACTGGCATGT
TGTTTCGGTGGATGGGCATAAAACGAAAGGACATTACACCTTTAGTGTGAAATAA

Upstream 100 bases:

>100_bases
GAGTGAGCCTTGATGGCAAGCCGGAATTGATGATCCTCGACTCAGACATTAGACAAGGTTATGCTCTGTAAAAAAGTTAT
TACAAAAAGGAATAGATAAT

Downstream 100 bases:

>100_bases
ATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACCTCGCTGATGCTGGTTTTTGGCTTCGCAATGTA
CGGTGCCTGGCTGGCCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKR
NEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK

Sequences:

>Translated_124_residues
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKR
NEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
>Mature_123_residues
ASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRN
EQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family

Homologues:

Organism=Escherichia coli, GI1788146, Length=124, Percent_Identity=100, Blast_Score=255, Evalue=5e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBA_ECOL6 (P0AA58)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754145.1
- ProteinModelPortal:   P0AA58
- SMR:   P0AA58
- EnsemblBacteria:   EBESCT00000042986
- GeneID:   1036771
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2251
- GeneTree:   EBGT00050000011265
- HOGENOM:   HBG730514
- OMA:   TIHFTEP
- ProtClustDB:   PRK10301
- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1220

Pfam domain/function: PF04234 CopC; SSF81296 Ig_E-set

EC number: NA

Molecular weight: Translated: 13410; Mature: 13279

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCEEEEEECCCCCCCCC
SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYT
CCCEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEE
FSVK
EEEC
>Mature Secondary Structure 
ASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCEEEEEECCCCCCCCC
SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYT
CCCEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEE
FSVK
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157