| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yebZ [H]
Identifier: 218689778
GI number: 218689778
Start: 1992918
End: 1993790
Strand: Reverse
Name: yebZ [H]
Synonym: ECED1_2045
Alternate gene names: 218689778
Gene position: 1993790-1992918 (Counterclockwise)
Preceding gene: 218689779
Following gene: 218689777
Centisome position: 38.27
GC content: 53.04
Gene sequence:
>873_bases ATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACCTCGCTGATGCTGGTTTTTGGCTTCGCAATGTACGG TGCCTGGCTGGCCACCTTAACGATTCGTCGCTTGCTGACGAAGCGTTTTCTGCGTTTACAACAGCACGCTGCCGTCTGGA GTTTGATCAGTGCCACTGCAATGCTCGCCGTTCAGGGCGGGTTGATGGGAGCGGGATGGTCAGATGTATTTTCGCCAAAC ATTTGGTTGGCTGTTTTGCAAACGCAGTTTGGTGGCGTCTGGTTATGGCAAATTGTTCTCGCCCTCGTAACGTTGATCGT CGCCCTTATGCAACCGCGGAATATGCCACGTTTGCTGTTTATGCTCACTACCGCGCAATTTATTCTGCTGGCGGGAGTCG GGCATGCGACGTTGAATGAAGGGGTAACGGCGAAAATCCATCAGACTAATCACGCAATTCACCTGATCTGTGCGGCGGCG TGGTTTGGGGGATTACTGCCGGTGCTCTGGTGTATGCAACTCATCAAAGGCCGTTGGCGACACCAGGCTATTCAGGCGCT GATGCGTTTTTCCTGGTGCGGGCATTTTGCGGTGATCGGCGTACTGGCAAGCGGCGTGCTTAATGCATTGTTGATTACCG GATTTCCCCCCACGCTTACGACTTACTGGGGCCAACTCTTATTGCTCAAAGCCATCCTGGTGATGATTATGGTGGTCATC GCGCTGGCTAATCGTTATGTTCTTGTACCGCGCATGAGGCAGGATGAAGATCGTGCGGCTCCCTGGTTTGTCTGGATGAC TAAACTCGAATGGGCGATAGGTGCGGTAGTGCTGGTGATCATCAGCCTGCTTGCGACTCTCGAACCTTTTTGA
Upstream 100 bases:
>100_bases CGATTCGCTGAAACCCGGAACCTACACCGTTGACTGGCATGTTGTTTCGGTGGATGGGCATAAAACGAAAGGACATTACA CCTTTAGTGTGAAATAAATC
Downstream 100 bases:
>100_bases TGGATTACGAAAATGATGAGAAAAAGTATTCTGGCGTTTCTGTTACTCACCAGTTCTGCAGCTGCGCTGGCGGCACCGCA GGTGATTACCGTCAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLAFTWIALRFIHFTSLMLVFGFAMYGAWLATLTIRRLLTKRFLRLQQHAAVWSLISATAMLAVQGGLMGAGWSDVFSPN IWLAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAA WFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI ALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF
Sequences:
>Translated_290_residues MLAFTWIALRFIHFTSLMLVFGFAMYGAWLATLTIRRLLTKRFLRLQQHAAVWSLISATAMLAVQGGLMGAGWSDVFSPN IWLAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAA WFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI ALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF >Mature_290_residues MLAFTWIALRFIHFTSLMLVFGFAMYGAWLATLTIRRLLTKRFLRLQQHAAVWSLISATAMLAVQGGLMGAGWSDVFSPN IWLAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAA WFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI ALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CopD family [H]
Homologues:
Organism=Escherichia coli, GI1788145, Length=290, Percent_Identity=97.9310344827586, Blast_Score=560, Evalue=1e-161,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 [H]
Pfam domain/function: PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 32488; Mature: 32488
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFTWIALRFIHFTSLMLVFGFAMYGAWLATLTIRRLLTKRFLRLQQHAAVWSLISATA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAVQGGLMGAGWSDVFSPNIWLAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLF HHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH MLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWR HHHHHHHHHHHCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF HHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLAFTWIALRFIHFTSLMLVFGFAMYGAWLATLTIRRLLTKRFLRLQQHAAVWSLISATA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAVQGGLMGAGWSDVFSPNIWLAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLF HHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH MLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWR HHHHHHHHHHHCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF HHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]