Definition Escherichia coli ED1a chromosome, complete genome.
Accession NC_011745
Length 5,209,548

Click here to switch to the map view.

The map label for this gene is dnaT [H]

Identifier: 218689490

GI number: 218689490

Start: 1710147

End: 1711193

Strand: Reverse

Name: dnaT [H]

Synonym: ECED1_1737

Alternate gene names: 218689490

Gene position: 1711193-1710147 (Counterclockwise)

Preceding gene: 218689491

Following gene: 218689489

Centisome position: 32.85

GC content: 54.73

Gene sequence:

>1047_bases
GTGAGTATGGCTAATGCCTGGCTCAGATTGTGGCATGACATGCCAAATGATCCCAAATGGCGAACCATTGCCAGGGTCTC
AGGACAGCCAATCGCAACAGTGATGGCGGTGTATATCCACCTTCTGGTGAGTGCGTCACGAAATGTCACGACATGTCACG
GCGTGTCACTACGTGGTCACATTGATGTCACGACGGAAGATTTAGCAAGTGCGCTTGATGTGGCGGAAGACGTAATTGAT
TCAATTTTGCATGCAATGCAGGGGCGGGTTCTGGATGGTGACCTTATTTCCGGATGGGAAAAACGTCAGGTGCTGAAAGA
GGACAATGGTAACGTTTCGCAAACGGCAAAATCCCCGGCAGAGCGCAAGAGAGCGCAGCGGGAGCGCGAAAAGCTGCGGA
AATATGATGCTGATTGTCACGATGAGTCACGACGTGTCACGCATCCGTCACGACAAGTCACGACAGATAAAGATACAGAT
ACAGAATTAAACCCCACACATAACGCGCGCATGCGCGAGAGTGCTCCAACCGGTGAGTCGCATGGTGCGCCGTTGCAGAC
AGCCGAACCTGAATACCTGGACGGCCTGAGCGAACCGATCGGGAAATTTTCGATGACTACTGTCTGGCAGCCGTCGTCGG
ATTTTCGACAACGGGCAGCAGTGTGGGGTATGGCTCTGCCTGAGCCGGAATTTACACCTGCAGAGCTTGCCGCATTCCGG
GATTACTGGATGGCGGAGGGGAAGGTTTTCACGCAGGTTCAGTGGGAGCAGAAATTTGCCCGCCACGTGCAGCACGTCAG
GGCACAGGTAAAACCAGTCAGCAAGGGGGTAAACCATGCAGCAGCACCAGGTGGCACCGCATCACGGGCAGTTCAGGAAA
TTCGGGCAGCACGTGAGCAGTGGGAACGTGAAAACGGATTTATCAGCGACGGAAACGGCCTGGAAGCTGTGGGAGCTTAT
GGGGGAGGTGTATTCGAACCGCTGGACCCAGAAGAACGGGGCCGCACCTTCGAAGCTCTGGATTGCCCAGATTGGCGCGA
TGACTGA

Upstream 100 bases:

>100_bases
GTGGTGGTCAGCCTGGTAATGCTGTTGTCGTGCATTGACCAACAATATTCATGCCGGATTTCTTCCGGATGTTCGAGGGT
AAAGTTCGGTATCAGATGAG

Downstream 100 bases:

>100_bases
ACAGCAAATCCGGCTGGTCTGCCGTCAGTGCATGGACCGCTGCCGGGCGGGTGAAACGTGGCCCCCGGACCTGGCTGAGT
TTGTTGCACTGATTTCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Primosomal protein I [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGHIDVTTEDLASALDVAEDVID
SILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPAERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTD
TELNPTHNARMRESAPTGESHGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR
DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGAY
GGGVFEPLDPEERGRTFEALDCPDWRDD

Sequences:

>Translated_348_residues
MSMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGHIDVTTEDLASALDVAEDVID
SILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPAERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTD
TELNPTHNARMRESAPTGESHGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR
DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGAY
GGGVFEPLDPEERGRTFEALDCPDWRDD
>Mature_347_residues
SMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGHIDVTTEDLASALDVAEDVIDS
ILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPAERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTDT
ELNPTHNARMRESAPTGESHGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFRD
YWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQWERENGFISDGNGLEAVGAYG
GGVFEPLDPEERGRTFEALDCPDWRDD

Specific function: This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaT family [H]

Homologues:

Organism=Escherichia coli, GI1790824, Length=73, Percent_Identity=56.1643835616438, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020917 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38918; Mature: 38786

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGH
CCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEECE
IDVTTEDLASALDVAEDVIDSILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPA
EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCHH
ERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTDTELNPTHNARMRESAPTGES
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
HGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR
CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQ
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
WERENGFISDGNGLEAVGAYGGGVFEPLDPEERGRTFEALDCPDWRDD
HHHHCCCCCCCCCCEEHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCC
>Mature Secondary Structure 
SMANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTTCHGVSLRGH
CHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEECE
IDVTTEDLASALDVAEDVIDSILHAMQGRVLDGDLISGWEKRQVLKEDNGNVSQTAKSPA
EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCHH
ERKRAQREREKLRKYDADCHDESRRVTHPSRQVTTDKDTDTELNPTHNARMRESAPTGES
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
HGAPLQTAEPEYLDGLSEPIGKFSMTTVWQPSSDFRQRAAVWGMALPEPEFTPAELAAFR
CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DYWMAEGKVFTQVQWEQKFARHVQHVRAQVKPVSKGVNHAAAPGGTASRAVQEIRAAREQ
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
WERENGFISDGNGLEAVGAYGGGVFEPLDPEERGRTFEALDCPDWRDD
HHHHCCCCCCCCCCEEHHCCCCCCCCCCCHHHHCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA