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The map label for this gene is uidR [C]

Identifier: 218689282

GI number: 218689282

Start: 1471737

End: 1472402

Strand: Direct

Name: uidR [C]

Synonym: ECED1_1500

Alternate gene names: 218689282

Gene position: 1471737-1472402 (Clockwise)

Preceding gene: 218689274

Following gene: 218689283

Centisome position: 28.25

GC content: 45.95

Gene sequence:

>666_bases
ATGAATAAGATAAAAATACTTTCCATTACTTTGGAGAAACGTATAATTAGCAAAAATGAGAACGATCATTCTCACCAAGT
GATAGGCCAGGAGACAGAAATGACCAGCAAGCTGGAGATACGCCACAAACAGCGTCAGGATGAAATCATTAACGCCGCCC
GTCGGTGTTTTCGTCGCTGCGGATTTCATGCCGCCAGTATGTCGCAAATTGCCAGCGAAGCTCAGCTTAGCGTGGGTCAG
ATATATCGTTACTTCGCCAACAAAGACGCCATTATTGAAGAGATGGTTCGCCGTATCATCGACTTTCGTATTGCCCAAAT
GGACATTGACGCGCGTACCGATCACTTCCCGGAAGTCCTTGCCTTGCGTAAATCCTTAAATGAGGACGACGACGCGCTGA
TGCTGGAAGTGGCTGCAGAAGCCACACGCAACCCGCGGGTTATGGCAATGCTTGAAGAAGCTGACGCCAGAATGTTCGCT
AACGGTTGTGCACATATGAAAAGAATGCATCCCCATCTTAGCGACGAGCACATTCGTTGCTGCGTTGAAGTGTTTGCTAC
CATGATGGAAGGTACGGTTTATCGTCGTTTAACACCGCAAAAAAGCGATCCACAACATCTGCAGGAAATATATCAGGATA
TTGTTAGTATGTTGATAAATAAATAA

Upstream 100 bases:

>100_bases
GACAACAAGTCGCTGTCTTTCTGATGAATTGACCCCAACTTAATATTGTCAACTATCTTCACAGAATCTCCACAATCTCT
TCATTATCAGAATATGCATC

Downstream 100 bases:

>100_bases
GAACAGAATTAACCAATAGCGGGGGATATTAATCCCCCTTATTTCATTGCGAAATTCATTTCGCGATGCGGGTTCGTTAT
AACTGAATATCCCTGACATA

Product: putative transcriptional repressor

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator EefR; HTH-Type Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; HTH-Type Transcriptional Regulator BetI; Regulatory Protein Tetr

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNKIKILSITLEKRIISKNENDHSHQVIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQ
IYRYFANKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFA
NGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK

Sequences:

>Translated_221_residues
MNKIKILSITLEKRIISKNENDHSHQVIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQ
IYRYFANKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFA
NGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK
>Mature_221_residues
MNKIKILSITLEKRIISKNENDHSHQVIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQ
IYRYFANKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFA
NGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25657; Mature: 25657

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKILSITLEKRIISKNENDHSHQVIGQETEMTSKLEIRHKQRQDEIINAARRCFRRC
CCCEEEEEEHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRC
HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
CVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK
HHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKIKILSITLEKRIISKNENDHSHQVIGQETEMTSKLEIRHKQRQDEIINAARRCFRRC
CCCEEEEEEHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRC
HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
CVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK
HHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA