| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is creD [H]
Identifier: 218551704
GI number: 218551704
Start: 4585096
End: 4586454
Strand: Direct
Name: creD [H]
Synonym: EFER_4499
Alternate gene names: 218551704
Gene position: 4585096-4586454 (Clockwise)
Preceding gene: 218551703
Following gene: 218551706
Centisome position: 99.92
GC content: 45.55
Gene sequence:
>1359_bases ATGTTGAGATCCCCATTGTTGTGGAAAATTGTCACGTTAAGTGGCGCTATTTTGTTGTTACTGATTCCGTTGTCGATGAT CCGCCTGGTGGTCACTGAACGAGCCCATTACCTGAGTAATGTTGAAGATTCGATTCGACAAAGTACCAGTGGTTCGCAAA AAGTTGTTGGTCCGCTCATCGCGATTCCGGTTACAGAGTTGTACACCGTACTTGAGGATGACAAAGAGGTTGAACGCAAG CGTAGTTTTATACATTTCTGGTTACCTGAATCGTTGATGGTTGATGGCAATCAGAATGTTGAAGAACGCAAAATTGGTAT TTATTCCGGGCAAGTATGGCACAGCGATTTATCGATGAAAGCAGACTTTGACACGGCGCGGTTAAGTGAACTGAATAAAC CCAATATTACTCTTGGAAGACCATTTATTGTGGTTGGTGTGGGCGATGCCAGGGGAATAGGCCTTGTTAAAGCACCGCAG ATCAATGGTAATACCTTGAGTGTTGAACCTGGCACTGGATTGCAGGATCACTCGTCTGGCGTACATATTCCGTTGCCAGA GGGGTTTTCGCTTGATGAGAACCTCAGTTTGGCAATGTCGTTGAGCCTGAGTGGAACGGGCAGTTTCTCCGTTGTGCCTA CCGGGCGCAATAGTGAAATGACGCTAACCAGCAACTGGCCACACCCCAGTTTTTTAGGCGATTTTTTACCTTCACAACGT GAAGTCAGTGCATCAGGATTCCACGTACAATGGCAAAGTAGTTGGTTTGCCAATAATCTGGGGGAGCGTTTATCAAAAGC CGATAAAATTCAATGGCTTCAATTACCGTCATTTAGTGTTGCCGTCGCAACACCTGCAGATCAATATCAGCTAACTGACC GGGCAACAAAATATGCCATTTTGTTGATTTCTCTTACCTTTATGGCTTTTTTCGTATTCGAAACCACAACGGAACAGCGA TTGCACCCGATGCAATATCTGTTGGTTGGTTTGTCGTTAGTCATGTTCTATCTGCTGTTGCTGGCGTTAGCAGAACATAT TGGATTTACTCTGGCGTGGGTTGTCGCAAGCCTGGTCGGAGCATTGATGAATGGCGTTTATCTTCAGGCAGTGCTGAAAG GTTGGCGCGTTAGTCTGGTATTTACACTGGCGCTATTAATGCTCGATGGTGTTATGTGGGCGCTATTACGTTCTGAAGAC AGTGCGTTATTGCTCGGAACCAGCGTACTGTTATTAGCCTTAGGGGGGATGATGTTTGTAACACGGCATATCGACTGGTA TGCACTTTCTCTGCCCAAAATGAAGAATGCGAAAATCGCACACACAGATATGAGCGATGAATTACGGATCTGGAAATAG
Upstream 100 bases:
>100_bases TGGCGTACTGGCTTCGTTATCACTTCACCGTTACTTCACATAACTTCAAATTCTCTGCACATAACCTTTTTATTCTGCAA GCCTTGCAAAGGAGAAGGTT
Downstream 100 bases:
>100_bases ATTTTTTCAGGCAATAAAAAACGGCGCCGGGAGCGCCGTTTTTACTGATTCAAAAGGAAGGTCATTAATCTTCCAGGTCA CCGCAGAAGCGGTAGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MLRSPLLWKIVTLSGAILLLLIPLSMIRLVVTERAHYLSNVEDSIRQSTSGSQKVVGPLIAIPVTELYTVLEDDKEVERK RSFIHFWLPESLMVDGNQNVEERKIGIYSGQVWHSDLSMKADFDTARLSELNKPNITLGRPFIVVGVGDARGIGLVKAPQ INGNTLSVEPGTGLQDHSSGVHIPLPEGFSLDENLSLAMSLSLSGTGSFSVVPTGRNSEMTLTSNWPHPSFLGDFLPSQR EVSASGFHVQWQSSWFANNLGERLSKADKIQWLQLPSFSVAVATPADQYQLTDRATKYAILLISLTFMAFFVFETTTEQR LHPMQYLLVGLSLVMFYLLLLALAEHIGFTLAWVVASLVGALMNGVYLQAVLKGWRVSLVFTLALLMLDGVMWALLRSED SALLLGTSVLLLALGGMMFVTRHIDWYALSLPKMKNAKIAHTDMSDELRIWK
Sequences:
>Translated_452_residues MLRSPLLWKIVTLSGAILLLLIPLSMIRLVVTERAHYLSNVEDSIRQSTSGSQKVVGPLIAIPVTELYTVLEDDKEVERK RSFIHFWLPESLMVDGNQNVEERKIGIYSGQVWHSDLSMKADFDTARLSELNKPNITLGRPFIVVGVGDARGIGLVKAPQ INGNTLSVEPGTGLQDHSSGVHIPLPEGFSLDENLSLAMSLSLSGTGSFSVVPTGRNSEMTLTSNWPHPSFLGDFLPSQR EVSASGFHVQWQSSWFANNLGERLSKADKIQWLQLPSFSVAVATPADQYQLTDRATKYAILLISLTFMAFFVFETTTEQR LHPMQYLLVGLSLVMFYLLLLALAEHIGFTLAWVVASLVGALMNGVYLQAVLKGWRVSLVFTLALLMLDGVMWALLRSED SALLLGTSVLLLALGGMMFVTRHIDWYALSLPKMKNAKIAHTDMSDELRIWK >Mature_452_residues MLRSPLLWKIVTLSGAILLLLIPLSMIRLVVTERAHYLSNVEDSIRQSTSGSQKVVGPLIAIPVTELYTVLEDDKEVERK RSFIHFWLPESLMVDGNQNVEERKIGIYSGQVWHSDLSMKADFDTARLSELNKPNITLGRPFIVVGVGDARGIGLVKAPQ INGNTLSVEPGTGLQDHSSGVHIPLPEGFSLDENLSLAMSLSLSGTGSFSVVPTGRNSEMTLTSNWPHPSFLGDFLPSQR EVSASGFHVQWQSSWFANNLGERLSKADKIQWLQLPSFSVAVATPADQYQLTDRATKYAILLISLTFMAFFVFETTTEQR LHPMQYLLVGLSLVMFYLLLLALAEHIGFTLAWVVASLVGALMNGVYLQAVLKGWRVSLVFTLALLMLDGVMWALLRSED SALLLGTSVLLLALGGMMFVTRHIDWYALSLPKMKNAKIAHTDMSDELRIWK
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=452, Percent_Identity=76.7699115044248, Blast_Score=692, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 50100; Mature: 50100
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSPLLWKIVTLSGAILLLLIPLSMIRLVVTERAHYLSNVEDSIRQSTSGSQKVVGPLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AIPVTELYTVLEDDKEVERKRSFIHFWLPESLMVDGNQNVEERKIGIYSGQVWHSDLSMK HHHHHHHHHHHCCHHHHHHHHCEEEEECCCEEEECCCCCHHHHEEEEEECCEEECCCCEE ADFDTARLSELNKPNITLGRPFIVVGVGDARGIGLVKAPQINGNTLSVEPGTGLQDHSSG CCCCHHHHHHCCCCCEEECCCEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCC VHIPLPEGFSLDENLSLAMSLSLSGTGSFSVVPTGRNSEMTLTSNWPHPSFLGDFLPSQR EEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCHHHHHHHCCCCC EVSASGFHVQWQSSWFANNLGERLSKADKIQWLQLPSFSVAVATPADQYQLTDRATKYAI CCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHH LLISLTFMAFFVFETTTEQRLHPMQYLLVGLSLVMFYLLLLALAEHIGFTLAWVVASLVG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMNGVYLQAVLKGWRVSLVFTLALLMLDGVMWALLRSEDSALLLGTSVLLLALGGMMFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH TRHIDWYALSLPKMKNAKIAHTDMSDELRIWK HHCCCEEEEECCCCCCCEEEECCCCCCCEECC >Mature Secondary Structure MLRSPLLWKIVTLSGAILLLLIPLSMIRLVVTERAHYLSNVEDSIRQSTSGSQKVVGPLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AIPVTELYTVLEDDKEVERKRSFIHFWLPESLMVDGNQNVEERKIGIYSGQVWHSDLSMK HHHHHHHHHHHCCHHHHHHHHCEEEEECCCEEEECCCCCHHHHEEEEEECCEEECCCCEE ADFDTARLSELNKPNITLGRPFIVVGVGDARGIGLVKAPQINGNTLSVEPGTGLQDHSSG CCCCHHHHHHCCCCCEEECCCEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCC VHIPLPEGFSLDENLSLAMSLSLSGTGSFSVVPTGRNSEMTLTSNWPHPSFLGDFLPSQR EEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCHHHHHHHCCCCC EVSASGFHVQWQSSWFANNLGERLSKADKIQWLQLPSFSVAVATPADQYQLTDRATKYAI CCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHH LLISLTFMAFFVFETTTEQRLHPMQYLLVGLSLVMFYLLLLALAEHIGFTLAWVVASLVG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMNGVYLQAVLKGWRVSLVFTLALLMLDGVMWALLRSEDSALLLGTSVLLLALGGMMFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH TRHIDWYALSLPKMKNAKIAHTDMSDELRIWK HHCCCEEEEECCCCCCCEEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]