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The map label for this gene is yiaG [C]

Identifier: 218551694

GI number: 218551694

Start: 4575571

End: 4575867

Strand: Direct

Name: yiaG [C]

Synonym: EFER_4489

Alternate gene names: 218551694

Gene position: 4575571-4575867 (Clockwise)

Preceding gene: 218551693

Following gene: 218551696

Centisome position: 99.71

GC content: 43.43

Gene sequence:

>297_bases
GTGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAGA
ACCTGCACGGGTGACCCGCTACGAAATTGCGGATGTTAAAGCTATTCGTGAGCAACTCAACGTTTCGCAAAGTGAGATGG
CAAAAGCTCTGGGAACCAGTGTGGATACCATTAAAAGCTGGGAATCGAAGCGAAGAAATCCTACGGGATTGGCTGCAAAA
GTACTTGCCACAATTAAAGAAAATCCTGCCTTTTTCCGGGAACTTGCCTCCCATTAA

Upstream 100 bases:

>100_bases
GAGATTATTTATTTGATTATGGCCTATCCGAAGAATGCCAAAGACAGTCTGACAGATACGGAAAAAGCTCAACTAAAGAA
GTTGACGAAACTGCTCAAAG

Downstream 100 bases:

>100_bases
TCATTTAACTATTACCGGATGCGATGCTGGCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTG
ATACGCTTCGGCTCCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulatory Protein; Transcriptional Regulator HTH_3 Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Family Protein; HTH-Type Transcriptional Regulator YiaG; Helix-Turn-Helix Containing Protein; Transcriptional Repressor

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRYKMSFFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIKSWESKRRNPTGLAAK
VLATIKENPAFFRELASH

Sequences:

>Translated_98_residues
MRYKMSFFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIKSWESKRRNPTGLAAK
VLATIKENPAFFRELASH
>Mature_98_residues
MRYKMSFFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIKSWESKRRNPTGLAAK
VLATIKENPAFFRELASH

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11131; Mature: 11131

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYKMSFFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTS
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH
VDTIKSWESKRRNPTGLAAKVLATIKENPAFFRELASH
HHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MRYKMSFFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTS
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH
VDTIKSWESKRRNPTGLAAKVLATIKENPAFFRELASH
HHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA