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The map label for this gene is higB-2 [H]

Identifier: 218551693

GI number: 218551693

Start: 4575171

End: 4575581

Strand: Direct

Name: higB-2 [H]

Synonym: EFER_4488

Alternate gene names: 218551693

Gene position: 4575171-4575581 (Clockwise)

Preceding gene: 218551692

Following gene: 218551694

Centisome position: 99.7

GC content: 41.61

Gene sequence:

>411_bases
ATGTTGAGTGATATTACTGATTCAAAAGTGTACTTAGTACTCCATTTTGGTGTACAATGTACCTGCCAGGGAGGGGTAAT
GGGCAAGGCGATAATATTTATAGAGACGCCAATGTTTACGCGTCAGATCAAGCAGATTGCAACCGATGATGAATTAAAGG
AATTGCAAAAAGAACTCATCGGAACTCCCGATAAAGGTGATCTCATTCAGCAGACTGGTGGATTGCGTAAAGTCCGAATG
GCTGCGGGTTCACAGGGAAAAAGTGGCAGTGTCAGAATAATTTACTTTCTGGCGACGGAAGAGATTATTTATTTGATTAT
GGCCTATCCGAAGAATGCCAAAGACAGTCTGACAGATACGGAAAAAGCTCAACTAAAGAAGTTGACGAAACTGCTCAAAG
GTGAGGTATAA

Upstream 100 bases:

>100_bases
TTTGTGCGGGTTGAAGAAGACGATTACGACAGCCGTTTCCTGCGCTGTGTGGAGCTGGTGCGGGAGATGATGGGGGAGCA
GGGATAATCATCTTTATAAG

Downstream 100 bases:

>100_bases
AATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAGAACCTGCACGGG
TGACCCGCTACGAAATTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLSDITDSKVYLVLHFGVQCTCQGGVMGKAIIFIETPMFTRQIKQIATDDELKELQKELIGTPDKGDLIQQTGGLRKVRM
AAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDTEKAQLKKLTKLLKGEV

Sequences:

>Translated_136_residues
MLSDITDSKVYLVLHFGVQCTCQGGVMGKAIIFIETPMFTRQIKQIATDDELKELQKELIGTPDKGDLIQQTGGLRKVRM
AAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDTEKAQLKKLTKLLKGEV
>Mature_136_residues
MLSDITDSKVYLVLHFGVQCTCQGGVMGKAIIFIETPMFTRQIKQIATDDELKELQKELIGTPDKGDLIQQTGGLRKVRM
AAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDTEKAQLKKLTKLLKGEV

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15069; Mature: 15069

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDITDSKVYLVLHFGVQCTCQGGVMGKAIIFIETPMFTRQIKQIATDDELKELQKELI
CCCCCCCCEEEEEEEECEEEEECCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHC
GTPDKGDLIQQTGGLRKVRMAAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDT
CCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCH
EKAQLKKLTKLLKGEV
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSDITDSKVYLVLHFGVQCTCQGGVMGKAIIFIETPMFTRQIKQIATDDELKELQKELI
CCCCCCCCEEEEEEEECEEEEECCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHC
GTPDKGDLIQQTGGLRKVRMAAGSQGKSGSVRIIYFLATEEIIYLIMAYPKNAKDSLTDT
CCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCH
EKAQLKKLTKLLKGEV
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]