| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218551668
Identifier: 218551668
GI number: 218551668
Start: 4546151
End: 4546798
Strand: Direct
Name: 218551668
Synonym: EFER_4462
Alternate gene names: NA
Gene position: 4546151-4546798 (Clockwise)
Preceding gene: 218551667
Following gene: 218551669
Centisome position: 99.07
GC content: 60.19
Gene sequence:
>648_bases ATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCACGCATCTGCCTTTACGGGGATTTGCAACGATTTGG CCGCCGCATCGACCTTCGTGTGAAAACGGGGGCCGAAGCCATCCGGGCGCTGGCCACACAGCTCCCGGCGTTTCGTCAGA AACTGAATGAGGGCTGGTATCAGGTGCGCATTGCCGGGCGTGATGCAGGCGAAAATGAATTATCTGCCCGTCTTAATGAG CCGCTGGCAAATGGTGCCGTGATCCACATCGTGCCGCGTCTGGCGGGAGCTAAAAGTGGCGGTGTGTTTCAGGTGGTGCT TGGGGCGGCGCTGATTGCGGTGGCATGGTGGAATCCTGTGGGTTGGCTGGGTGCCGCGGCTGTATCGGGCATGTATGCGG CAGGGGCCAGTATGATCCTGGGCGGAGTGGCGCAGATGCTGGCACCGAAAGCCAGGACGCCCACGGCAGCCAGTACAGAT AACGGCAAACAGAACACGTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCCGTTCTGTACGGTGA AATGCGCGTGGGGTCGCGGGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGGGATGGTGGTCAGGTTGTGGTGATTG GTCGCTGA
Upstream 100 bases:
>100_bases GTTCATCGGTGCCGAATCATGCCGCTATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAA CGAGAGAGGTATACCGACAA
Downstream 100 bases:
>100_bases TACAAAATGTTTTATGTGAAACCGCCTGCGGGCGGTTTTGTCGTTTATGGAGCGTGAGGAATGGGTAAAGGCAGCAGTAA GGGGCATACCCCGCGCGAAG
Product: Tail assembly protein I from prophage
Products: NA
Alternate protein names: Bacteriophage Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly Protein I; Lambda Tail Assembly I; Bacteriophage Tail Protein; Tail Assembly Protein I; Phage-Related Protein Tail Component; Bacteriophage Protein; Tail Assembly Protein; Tail Assembly Protein I Prophage; Prophage LambdaSo Tail Assembly Protein I; Phage Tail Assembly Protein I; Phage Tail Component; Tail Assembly Protein I-Like; Phage Tail Protein; Gp63 Phage Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNEGWYQVRIAGRDAGENELSARLNE PLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTD NGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
Sequences:
>Translated_215_residues MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNEGWYQVRIAGRDAGENELSARLNE PLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTD NGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR >Mature_214_residues AATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNEGWYQVRIAGRDAGENELSARLNEP LANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTDN GKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22542; Mature: 22411
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNEGWY CCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE QVRIAGRDAGENELSARLNEPLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPV EEEEECCCCCCHHHHHHHCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHCCCH GWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTDNGKQNTYFSSLDNMVAQGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE LPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure AATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNEGWY CCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE QVRIAGRDAGENELSARLNEPLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPV EEEEECCCCCCHHHHHHHCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHCCCH GWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTDNGKQNTYFSSLDNMVAQGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE LPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA